Clusters of Characterized Proteins

Clustering the characterized proteins for citD (citrate lyase, acyl carrier component CitD) in citrate catabolism

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Definition of citD

• Curated sequence MONOMER-17000: citrate lyase γ subunit
• Curated sequence ACPSUB-MONOMER: citrate lyase gamma chain. Citrate lyase acyl carrier protein; Citrate lyase gamma chain. citrate lyase acyl carrier protein. citrate lyase acyl carrier protein
• Comment: Citrate lyase has 3 subunits citDEF; activity also requires acetylation by citrate lyase synthetase (citC); this is not represented here.

Fetched 2 sequences

Running BLASTp

Found similarities, at above 30% identity and 75% coverage, for 2 of these sequences

Found 1 clusters of similar sequences. Download as table or as draft rules or view by organism

Cluster 1 97-98 amino acids (not heteromeric)

b0617 citrate lyase acyl carrier protein from Escherichia coli K-12 substr. MG1655
P69330 citrate lyase acyl carrier protein from Escherichia coli (strain K12)
CITD_ECOLI / P69330 Citrate lyase acyl carrier protein; Citrate lyase gamma chain from Escherichia coli (strain K12)
EW|b0617 citrate lyase gamma chain from Escherichia coli K12
PFams: ACP
98 amino acids: PaperBLAST, CDD, Compare to cluster

P02903 citrate lyase γ subunit from Klebsiella pneumoniae
PFams: ACP
97 amino acids: PaperBLAST, CDD, Compare to cluster