GapMind for Amino acid biosynthesis

 

Clusters of Characterized Proteins

Clustering the characterized proteins for aroB' (dehydroquinate synthase II) in chorismate biosynthesis

Or see other characterized proteins similar to aroB'

Or see all steps for chorismate biosynthesis

Or cluster curated proteins matching a keyword

Definition of aroB'

Fetched 2 sequences

Running BLASTp

Found similarities, at above 30% identity and 75% coverage, for 2 of these sequences

Found 1 clusters of similar sequences. Download as table or as draft rules or view by organism

Cluster 1 361-361 amino acids (not heteromeric)

The first sequence in each cluster is the seed.

Q58646 dehydroquinate synthase II (EC 1.4.1.24) from Methanocaldococcus jannaschii (strain ATCC 43067 / DSM 2661 / JAL-1 / JCM 10045 / NBRC 100440)
DHQS_METJA / Q58646 3-dehydroquinate synthase; DHQ synthase; 3-dehydroquinate synthase II; EC 1.4.1.24 from Methanocaldococcus jannaschii (strain ATCC 43067 / DSM 2661 / JAL-1 / JCM 10045 / NBRC 100440) (Methanococcus jannaschii)
PFams: DHQS
361 amino acids: PaperBLAST, CDD, Compare to cluster

DHQS_METMP / Q6M1B0 3-dehydroquinate synthase; DHQ synthase; 3-dehydroquinate synthase II; EC 1.4.1.24 from Methanococcus maripaludis (strain S2 / LL)
PFams: DHQS
361 amino acids: PaperBLAST, CDD, Compare to cluster