Align acetylglutamate kinase (EC 2.7.2.8) (characterized)
to candidate AZOBR_RS03285 AZOBR_RS03285 acetylglutamate kinase
Query= BRENDA::Q9HTN2 (301 letters) >FitnessBrowser__azobra:AZOBR_RS03285 Length = 299 Score = 325 bits (834), Expect = 6e-94 Identities = 163/292 (55%), Positives = 215/292 (73%) Query: 4 SRDDAAQVAKVLSEALPYIRRFVGKTLVIKYGGNAMESEELKAGFARDVVLMKAVGINPV 63 +RD+ A+ LSEALPY+RR+ G+T VIKYGG+AM + L FARD+VL+K VGINPV Sbjct: 5 TRDEWLAKARTLSEALPYMRRYAGRTFVIKYGGHAMGDDSLAEKFARDIVLLKQVGINPV 64 Query: 64 VVHGGGPQIGDLLKRLSIESHFIDGMRVTDAATMDVVEMVLGGQVNKDIVNLINRHGGSA 123 VVHGGGPQIG +L+RL+I+S FIDG+RVTD T++VVEMVL G +NK IV IN GG A Sbjct: 65 VVHGGGPQIGQMLQRLAIKSSFIDGLRVTDKETVEVVEMVLAGSINKQIVAAINNAGGRA 124 Query: 124 IGLTGKDAELIRAKKLTVTRQTPEMTKPEIIDIGHVGEVTGVNVGLLNMLVKGDFIPVIA 183 +GL+GKD LI A+KL T++ P+ +++D+G VGE VN ++ L + D IPVIA Sbjct: 125 VGLSGKDGSLITARKLRRTQRDPDSNIEKVLDLGFVGEPYQVNPQIITSLAQSDIIPVIA 184 Query: 184 PIGVGSNGESYNINADLVAGKVAEALKAEKLMLLTNIAGLMDKQGQVLTGLSTEQVNELI 243 PIG NG++YNINAD AG VA AL A + LLT++AG++DK +++ +S +Q I Sbjct: 185 PIGFDRNGDTYNINADTAAGAVASALGATRFFLLTDVAGVLDKNKELVPRMSLDQARAAI 244 Query: 244 ADGTIYGGMLPKIRCALEAVQGGVTSAHIIDGRVPNAVLLEIFTDSGVGTLI 295 ADGT GGM+PKI ++AV+ GV +A I+DGRVP+A+LLEIFT+ G GTLI Sbjct: 245 ADGTATGGMIPKIETCIDAVEQGVDAAVILDGRVPHALLLEIFTEGGAGTLI 296 Lambda K H 0.318 0.138 0.381 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 1 Number of Hits to DB: 281 Number of extensions: 10 Number of successful extensions: 1 Number of sequences better than 1.0e-02: 1 Number of HSP's gapped: 1 Number of HSP's successfully gapped: 1 Length of query: 301 Length of database: 299 Length adjustment: 27 Effective length of query: 274 Effective length of database: 272 Effective search space: 74528 Effective search space used: 74528 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits) S2: 48 (23.1 bits)
Align candidate AZOBR_RS03285 AZOBR_RS03285 (acetylglutamate kinase)
to HMM TIGR00761 (argB: acetylglutamate kinase (EC 2.7.2.8))
../bin/blast/fastacmd -i /tmp/list.26795.in -d ../tmp/orgsDef_201/orgs.faa -p T > /tmp/gapView.26795.genome.faa failed: Inappropriate ioctl for device at ../lib/pbutils.pm line 379.
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