Alignments for a candidate for deoD in Echinicola vietnamensis KMM 6221, DSM 17526

Align Purine nucleoside phosphorylase 1; PNP 1; Inosine phosphorylase; Inosine-guanosine phosphorylase; Purine nucleoside phosphorylase I; PNP I; Pu-NPase I; EC 2.4.2.1 (characterized)
to candidate Echvi_0304 Echvi_0304 purine nucleoside phosphorylase I, inosine and guanosine-specific

Query= SwissProt::P77834
         (274 letters)



>FitnessBrowser__Cola:Echvi_0304
          Length = 282

 Score =  252 bits (644), Expect = 6e-72
 Identities = 129/264 (48%), Positives = 174/264 (65%)

Query: 6   IEQAAQFLKEKFPTSPQIGLILGSGLGVLADEIEQAIKIPYSDIPNFPVSTVEGHAGQLV 65
           I  A  ++ E+ P  P++G+ILG+GLG L D+IE    + Y DIP FP+STVE HAG+LV
Sbjct: 14  ITAAVTYISEQHPFIPEVGIILGTGLGQLIDKIEVEASLSYKDIPCFPISTVETHAGELV 73

Query: 66  YGQLEGATVVVMQGRFHYYEGYSFDKVTFPVRVMKALGVEQLIVTNAAGGVNESFEPGDL 125
            G L G  +V M+GRFHYYEGY    VTFPVRVM+ LG++QLIV+NAAGG++ +FE GD+
Sbjct: 74  LGTLHGVPIVAMKGRFHYYEGYDMKAVTFPVRVMRQLGIKQLIVSNAAGGLDPAFEVGDV 133

Query: 126 MIISDHINNMGGNPLIGPNDSALGVRFPDMSEAYSKRLRQLAKDVANDIGLRVREGVYVA 185
           M+I+DHI+    NPL G N    GVRFPDMSE Y +   + A  VA   G++V +GVY  
Sbjct: 134 MLINDHIDLFPENPLRGKNLDDFGVRFPDMSEPYDQGWLEAAVRVAKQEGIKVHQGVYAG 193

Query: 186 NTGPAYETPAEIRMIRVMGGDAVGMSTVPEVIVARHAGMEVLGISCISNMAAGILDQPLT 245
             GP  ET AE R +R +G DAVGMSTVPEVIVAR   + VL +S I+++ +    + ++
Sbjct: 194 VQGPNLETKAEYRYLRTIGADAVGMSTVPEVIVARQMELPVLAMSAITDLCSPGKVKKIS 253

Query: 246 HDEVIETTEKVKADFLRFVKAIVR 269
             EVI      +    R + +++R
Sbjct: 254 IQEVIAAAAIAEPKMTRIIASLIR 277


Lambda     K      H
   0.319    0.137    0.388 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 238
Number of extensions: 8
Number of successful extensions: 1
Number of sequences better than 1.0e-02: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 274
Length of database: 282
Length adjustment: 25
Effective length of query: 249
Effective length of database: 257
Effective search space:    63993
Effective search space used:    63993
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 47 (22.7 bits)

Align candidate Echvi_0304 Echvi_0304 (purine nucleoside phosphorylase I, inosine and guanosine-specific)
to HMM TIGR01700 (purine nucleoside phosphorylase I, inosine and guanosine-specific (EC 2.4.2.1))

Software error:

../bin/blast/fastacmd -i /tmp/list.19462.in -d ../tmp/orgsDef_201/orgs.faa -p T > /tmp/gapView.19462.genome.faa failed: Inappropriate ioctl for device at ../lib/pbutils.pm line 379.

For help, please send mail to the webmaster (help@microbesonline.org), giving this error message and the time and date of the error.