Alignments for a candidate for fbp in Echinicola vietnamensis KMM 6221, DSM 17526

Align fructose-bisphosphate aldolase (EC 4.1.2.13) (characterized)
to candidate Echvi_2849 Echvi_2849 fructose-bisphosphate aldolase, class II, yeast/E. coli subtype

Query= BRENDA::D0ZEE4
         (358 letters)



>FitnessBrowser__Cola:Echvi_2849
          Length = 353

 Score =  479 bits (1234), Expect = e-140
 Identities = 228/348 (65%), Positives = 279/348 (80%)

Query: 9   KPGVIFGDDVQKVFQVAKENKFALPAVNCVGTDSVNAVMEAAAKVRAPIIVQFSNGGAAF 68
           KPG+ FG++++ + + AKE++FALPAVN + T + NAV+E A KV +P+IVQFSNGGA F
Sbjct: 4   KPGIKFGEELKDLLEYAKESEFALPAVNVINTSTANAVLETAKKVNSPVIVQFSNGGAQF 63

Query: 69  IAGKGLKLEGQQAAILGAISGAHHVHQMAEYYGVPVILHTDHCAKKLLPWLDGLLDAGEK 128
            AGKGL  + QQA+I GA+SGA HVH+MAE YGVPVILHTDH AKKL+PW+DG+L+AG++
Sbjct: 64  FAGKGLANDKQQASIAGAVSGAMHVHKMAEAYGVPVILHTDHAAKKLIPWVDGMLEAGKE 123

Query: 129 HFAATGKPLFSSHMIDLSEESLEENIEICSQYLARMSKIGMTLELELGCTGGEEDGVDNS 188
           ++AA  KPLFSSHM+DLSEE +EENIE   +YLA   K+ M LE+ELG TGGEEDGVDN+
Sbjct: 124 YYAAFKKPLFSSHMLDLSEEPIEENIETSVKYLAEFKKLEMALEIELGVTGGEEDGVDNT 183

Query: 189 HLDNSALYTQPEDVDYAFTKLSAISPRFTIAASFGNVHGVYKPGNVQLTPVILKNSQEYV 248
            +D+S LYTQPE+V YA+ KL   S  FTIAA+FGNVHGVYKPGNV L P ILKNSQ+Y+
Sbjct: 184 DIDSSKLYTQPEEVAYAYEKLREQSELFTIAAAFGNVHGVYKPGNVSLQPKILKNSQDYI 243

Query: 249 SKKHNLPHNSLNFVFHGGSGSTAAEIKEAVSYGVVKMNIDTDTQWATWEGVLKYYKKNEG 308
            +K  L    ++FVFHGGSGS+  EI+EA  YG +KMNIDTD QWA WEGVLKYYK+NEG
Sbjct: 244 CEKFGLSGKPVSFVFHGGSGSSVEEIREATGYGSIKMNIDTDMQWAFWEGVLKYYKENEG 303

Query: 309 YLQGQLGNPEGDDKPNKKYYDPRVWLRAGQTGMIERLELAFKELNCID 356
           YLQ QLGNPEG D PNKK YDPRVWLR G+   ++RLE+AF  LN +D
Sbjct: 304 YLQTQLGNPEGPDVPNKKKYDPRVWLRKGEENFVKRLEVAFDMLNAVD 351


Lambda     K      H
   0.317    0.135    0.400 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 414
Number of extensions: 10
Number of successful extensions: 1
Number of sequences better than 1.0e-02: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 358
Length of database: 353
Length adjustment: 29
Effective length of query: 329
Effective length of database: 324
Effective search space:   106596
Effective search space used:   106596
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 49 (23.5 bits)

Align candidate Echvi_2849 Echvi_2849 (fructose-bisphosphate aldolase, class II, yeast/E. coli subtype)
to HMM TIGR01520 (fbaA: fructose-bisphosphate aldolase, class II (EC 4.1.2.13))

Software error:

../bin/blast/fastacmd -i /tmp/list.16776.in -d ../tmp/orgsDef_201/orgs.faa -p T > /tmp/gapView.16776.genome.faa failed: Inappropriate ioctl for device at ../lib/pbutils.pm line 379.

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