Align histidinol-phosphate aminotransferase (EC 2.6.1.9) (characterized)
to candidate Pf1N1B4_1065 Histidinol-phosphate aminotransferase (EC 2.6.1.9)
Query= reanno::pseudo6_N2E2:Pf6N2E2_3251
(350 letters)
>FitnessBrowser__pseudo1_N1B4:Pf1N1B4_1065
Length = 350
Score = 656 bits (1692), Expect = 0.0
Identities = 324/350 (92%), Positives = 340/350 (97%)
Query: 1 MSKFWSPFVKNLVPYVPGEQPKLTRLVKLNTNENPYGPSPKALAAMQTELNDNLRLYPDP 60
MSKFWSPFVK+LVPYVPGEQPKL +LVKLNTNENPYGPSPKALAAMQTELNDNLRLYPDP
Sbjct: 1 MSKFWSPFVKSLVPYVPGEQPKLAKLVKLNTNENPYGPSPKALAAMQTELNDNLRLYPDP 60
Query: 61 NSDLLKGAVARYYGVQSNQVFLGNGSDEVLAHIFHGLLQHDQPLLFPDISYSFYPVYCGL 120
NSDLLK AVA+YYGVQ NQVFLGNGSDEVLAHIFHGLLQHDQPLLFPDISYSFYPVYCGL
Sbjct: 61 NSDLLKQAVAKYYGVQGNQVFLGNGSDEVLAHIFHGLLQHDQPLLFPDISYSFYPVYCGL 120
Query: 121 YGIQFDAVPLDAQFQIDPADYAKPNGGIIFPNPNAPTGCLLALEAVEQILKANPDSVVVV 180
YGI FDAVPLD QFQI+PADYAKPNGGIIFPNPNAPTGCLLAL+AVEQILKA+PDSVVVV
Sbjct: 121 YGIAFDAVPLDEQFQINPADYAKPNGGIIFPNPNAPTGCLLALDAVEQILKASPDSVVVV 180
Query: 181 DEAYIDFGGETAISLVDRYPNLLVTQTLSKSRSLAGLRVGLAVGHPELIEALERIKNSFN 240
DEAYIDFGGETAI+LVDRYPNLLVTQTLSKSRSLAGLRVGLAVGHP+LIEALERIKNSFN
Sbjct: 181 DEAYIDFGGETAITLVDRYPNLLVTQTLSKSRSLAGLRVGLAVGHPDLIEALERIKNSFN 240
Query: 241 SYPLDRLANVGGAAAFDDREYFDRTCRLVIEHREWVVAQLQAKGFEVLPSAANFIFARHP 300
SYPLDRLA VG AAAF+DREYFD+TCRLVI+ RE VVAQL+AKGFEVLPSAANFIFARHP
Sbjct: 241 SYPLDRLAIVGAAAAFEDREYFDKTCRLVIDSREKVVAQLEAKGFEVLPSAANFIFARHP 300
Query: 301 RHDAAGLAAKLREQGVIVRHFKQERIAQFLRISIGTPEQNQALIEALGEL 350
+HDAAGLAAKLRE+GVIVRHFKQERIAQFLRISIGTPEQNQALI+ LG+L
Sbjct: 301 KHDAAGLAAKLRERGVIVRHFKQERIAQFLRISIGTPEQNQALIDGLGDL 350
Lambda K H
0.320 0.139 0.413
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 600
Number of extensions: 14
Number of successful extensions: 1
Number of sequences better than 1.0e-02: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 350
Length of database: 350
Length adjustment: 29
Effective length of query: 321
Effective length of database: 321
Effective search space: 103041
Effective search space used: 103041
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 49 (23.5 bits)
Align candidate Pf1N1B4_1065 (Histidinol-phosphate aminotransferase (EC 2.6.1.9))
to HMM TIGR01141 (hisC: histidinol-phosphate transaminase (EC 2.6.1.9))
../bin/blast/fastacmd -i /tmp/list.22683.in -d ../tmp/orgsDef_201/orgs.faa -p T > /tmp/gapView.22683.genome.faa failed: Inappropriate ioctl for device at ../lib/pbutils.pm line 379.
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