Alignments for a candidate for trpE in Cereibacter sphaeroides ATCC 17029

Align Anthranilate synthase component 1; AS; ASI; EC 4.1.3.27 (characterized)
to candidate WP_002719157.1 RSPH17029_RS03645 anthranilate synthase component I

Query= SwissProt::P20579
         (493 letters)



>NCBI__GCF_000015985.1:WP_002719157.1
          Length = 503

 Score =  444 bits (1142), Expect = e-129
 Identities = 256/496 (51%), Positives = 324/496 (65%), Gaps = 30/496 (6%)

Query: 4   EEFLRLAAVGYNRIPLACETLADFDTPLSIYLKLAD-QPNSYLLESVQGGEKWGRYSMIG 62
           E F R    G N+I  A  T AD DTP+S+ LKLA+ + ++++LESV GGE  GRYS++G
Sbjct: 8   ESFERGWKAGQNQIVYARLT-ADLDTPVSLMLKLAEARTDTFMLESVTGGEIRGRYSVVG 66

Query: 63  LPSRTVMRVHGYHVSILHDG-------VEVESHDVEDPLAFVESFKDRYKVADIPG-LPR 114
           +    + + HG    I  +          +E H +E   A +   +      ++P  LP 
Sbjct: 67  MKPDLIWQCHGQDSRINREARFDRQAFQPLEGHPLETLRALIAESR-----IEMPADLPP 121

Query: 115 FNGGLVGYFGYDCVRYVEKRLGVSPNPDPLGVPDILLMVSDAVVVFDNLAGKMHAIVLVD 174
              GL GY GYD +R VE   G+  NPDPLG+PD +LM    V V D + G+   + +V 
Sbjct: 122 IAAGLFGYLGYDMIRLVEHLPGI--NPDPLGLPDAVLMRPSVVAVLDGVKGE---VTVVA 176

Query: 175 PA-------EEQAFEQGQARLQGLLETLRQPITPRRGLDLSGPQAAEPEFRSSYTREDYE 227
           PA          A+ Q   R+   L  L +    +R     G  A   E RS++T E Y+
Sbjct: 177 PAWVSSGLSARAAYAQAAERVMDALRDLDRAPPAQRDF---GEVAQVGEMRSNFTHEGYK 233

Query: 228 NAVGRIKEYILAGDCMQVVPSQRMSIDFKAAPIDLYRALRCFNPTPYMYFFNFGDFHVVG 287
            AV + K+YI AGD  QVVPSQR + DF+  P  LYR+LR  NP+P+M+FFNFG F VVG
Sbjct: 234 AAVEKAKDYIRAGDIFQVVPSQRWAQDFRLPPFALYRSLRKTNPSPFMFFFNFGGFQVVG 293

Query: 288 SSPEVLVRVEDNLVTVRPIAGTRPRGATEEADRALEDDLLSDDKEIAEHLMLIDLGRNDV 347
           +SPE+LVR+ D  VTVRPIAGTR RGAT E DRALE DLLSD KE+AEHLML+DLGRNDV
Sbjct: 294 ASPEILVRLRDREVTVRPIAGTRKRGATPEEDRALEADLLSDKKELAEHLMLLDLGRNDV 353

Query: 348 GRVSSTGSVRLTEKMVIERYSNVMHIVSNVAGQLREGLTAMDALRAILPAGTLSGAPKIR 407
           GRV+  G+VR TEK +IERYS+VMHIVSNV G++ EG  A+ AL A LPAGT+SGAPK+R
Sbjct: 354 GRVAKIGTVRPTEKFIIERYSHVMHIVSNVVGEIAEGEDALSALLAGLPAGTVSGAPKVR 413

Query: 408 AMEIIDELEPVKRGVYGGAVGYFAWNGNMDTAIAIRTAVINDGELHVQAGGGIVADSVPA 467
           AMEIIDELEP KRGVYGG VGYFA NG MD  IA+RTAV+ D  L++Q+GGG+V DS P 
Sbjct: 414 AMEIIDELEPEKRGVYGGGVGYFAANGEMDFCIALRTAVLKDETLYIQSGGGVVYDSDPE 473

Query: 468 LEWEETINKRRAMFRA 483
            E++ET+NK RA+ RA
Sbjct: 474 AEYQETVNKARALRRA 489


Lambda     K      H
   0.320    0.138    0.403 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 675
Number of extensions: 30
Number of successful extensions: 5
Number of sequences better than 1.0e-02: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 493
Length of database: 503
Length adjustment: 34
Effective length of query: 459
Effective length of database: 469
Effective search space:   215271
Effective search space used:   215271
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 52 (24.6 bits)

Align candidate WP_002719157.1 RSPH17029_RS03645 (anthranilate synthase component I)
to HMM TIGR00564 (trpE: anthranilate synthase component I (EC 4.1.3.27))

Software error:

../bin/blast/fastacmd -i /tmp/list.724.in -d ../tmp/NCBI__GCF_000015985.1/orgs.faa -p T > /tmp/gapView.724.genome.faa failed: Inappropriate ioctl for device at ../lib/pbutils.pm line 379.

For help, please send mail to the webmaster (help@microbesonline.org), giving this error message and the time and date of the error.