Alignments for a candidate for cysE in Cereibacter sphaeroides ATCC 17029

Align serine O-acetyltransferase (EC 2.3.1.30) (characterized)
to candidate WP_002719636.1 RSPH17029_RS05830 serine O-acetyltransferase

Query= BRENDA::C4IRW0
         (281 letters)



>NCBI__GCF_000015985.1:WP_002719636.1
          Length = 268

 Score =  299 bits (765), Expect = 5e-86
 Identities = 138/258 (53%), Positives = 186/258 (72%)

Query: 23  VDPIWHSIRAEAEEATRNDPVLGAFLYATILNQPSLEEAVMHRIAERLGHPDVSADILRQ 82
           VDP+W  I  E   A   +P+LG  +++++L+ PS+E A+ +R + +L   ++S  ILR+
Sbjct: 11  VDPVWQRIVEEGHAAILAEPLLGGLVHSSLLHHPSMERALAYRFSLKLASGEMSEQILRE 70

Query: 83  TFDTMLEANPEWSHVLRVDIQAVYDRDPAYSRFMDPVLYLKGFHAIQTHRLAHWLYKQGR 142
             D    ++PE   + R D+ AVY+RDPA  RF+ P+L+ KG+ A+Q +R+ HWL+  GR
Sbjct: 71  IADEAYASDPELGQMARADMVAVYERDPACHRFLQPILFFKGYQAVQAYRVGHWLWTNGR 130

Query: 143 KDFAYYLQSRSSSIFQTDIHPAARLGSGLFLDHATGLVVGETAVVEDNVSILHGVTLGGT 202
           +D AY++Q R S  F  D+HPAAR+G G+ +DHA  +V+GETAVV DNVS+LH VTLGGT
Sbjct: 131 QDLAYFVQMRVSEAFGVDVHPAARIGRGIMIDHAHSIVIGETAVVGDNVSMLHSVTLGGT 190

Query: 203 GKSSGDRHPKIRQGVLIGAGAKILGNIQVGQCSKIAAGSVVLKSVPHNVTVAGVPARIIG 262
           GK  GDRHPKI  GVLIGAGAK+LGNI VG CS+IAAGSVVL+ VP   TVAGVPAR++G
Sbjct: 191 GKEDGDRHPKIGNGVLIGAGAKVLGNIHVGHCSRIAAGSVVLQDVPPCTTVAGVPARVVG 250

Query: 263 ETGCTEPSRVMDQMLGDG 280
           E GC +P+  MD +L DG
Sbjct: 251 EAGCAQPAVTMDHLLSDG 268


Lambda     K      H
   0.320    0.135    0.403 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 297
Number of extensions: 11
Number of successful extensions: 1
Number of sequences better than 1.0e-02: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 281
Length of database: 268
Length adjustment: 25
Effective length of query: 256
Effective length of database: 243
Effective search space:    62208
Effective search space used:    62208
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 47 (22.7 bits)

Align candidate WP_002719636.1 RSPH17029_RS05830 (serine O-acetyltransferase)
to HMM TIGR01172 (cysE: serine O-acetyltransferase (EC 2.3.1.30))

Software error:

../bin/blast/fastacmd -i /tmp/list.17307.in -d ../tmp/NCBI__GCF_000015985.1/orgs.faa -p T > /tmp/gapView.17307.genome.faa failed: Inappropriate ioctl for device at ../lib/pbutils.pm line 379.

For help, please send mail to the webmaster (help@microbesonline.org), giving this error message and the time and date of the error.