Align acetolactate synthase (subunit 1/2) (EC 2.2.1.6) (characterized)
to candidate WP_002719784.1 RSPH17029_RS06555 acetolactate synthase small subunit
Query= BRENDA::P00894
(163 letters)
>NCBI__GCF_000015985.1:WP_002719784.1
Length = 186
Score = 120 bits (300), Expect = 2e-32
Identities = 73/156 (46%), Positives = 100/156 (64%), Gaps = 3/156 (1%)
Query: 5 LSVLLENESGALSRVIGLFSQRGYNIESLTVAPTDDP-TLSRMTIQTVGDEKVLEQIEKQ 63
L+++++NESG L+RVIGLFS RGYNI+SLTVA D SR+TI T G V+EQI+ Q
Sbjct: 31 LALVVDNESGVLARVIGLFSGRGYNIDSLTVAEVDHTGHRSRITIVTRGTPAVIEQIKAQ 90
Query: 64 LHKLVDVLRVSELG-QGAHVEREIMLVKIQASGYGRDEVKRNTEIFRGQIIDVTPSLYTV 122
L +LV V V +L +G V+RE+ L K+ G R E R EIFR +++D T +
Sbjct: 91 LARLVPVHEVHDLTVEGPSVQRELALFKVSGKGEARIEALRLAEIFRAKVVDSTLESFVF 150
Query: 123 QLAGTSGKLDAFLASIRDVAKIVEVARSGVVGLSRG 158
++ GT K+DA LA + + E+AR+GV LSRG
Sbjct: 151 EITGTPEKIDA-LADLMRPLGLREMARTGVAALSRG 185
Lambda K H
0.318 0.136 0.360
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 85
Number of extensions: 5
Number of successful extensions: 4
Number of sequences better than 1.0e-02: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 163
Length of database: 186
Length adjustment: 19
Effective length of query: 144
Effective length of database: 167
Effective search space: 24048
Effective search space used: 24048
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 44 (21.6 bits)
Align candidate WP_002719784.1 RSPH17029_RS06555 (acetolactate synthase small subunit)
to HMM TIGR00119 (ilvN: acetolactate synthase, small subunit (EC 2.2.1.6))
../bin/blast/fastacmd -i /tmp/list.9147.in -d ../tmp/NCBI__GCF_000015985.1/orgs.faa -p T > /tmp/gapView.9147.genome.faa failed: Inappropriate ioctl for device at ../lib/pbutils.pm line 379.
For help, please send mail to the webmaster (help@microbesonline.org), giving this error message and the time and date of the error.