Align aspartate kinase (EC 2.7.2.4) (characterized)
to candidate WP_007051616.1 BL_RS06265 aspartate kinase
Query= BRENDA::P9WPX3
(421 letters)
>NCBI__GCF_000007525.1:WP_007051616.1
Length = 254
Score = 308 bits (788), Expect = 2e-88
Identities = 156/242 (64%), Positives = 195/242 (80%), Gaps = 1/242 (0%)
Query: 1 MALVVQKYGGSSVADAERIRRVAERIVATKKQGNDVVVVVSAMGDTTDDLLDLAQQVCPA 60
MAL+VQKYGGSSVAD E I+RVA+R+V T+K+GN V VVVSAMGDTTDDL+D A +
Sbjct: 1 MALIVQKYGGSSVADTESIKRVAKRVVETEKKGNKVAVVVSAMGDTTDDLIDQALSIDSN 60
Query: 61 PPPRELDMLLTAGERISNALVAMAIESLGAHARSFTGSQAGVITTGTHGNAKIIDVTPGR 120
PP RE+DML+TAGERIS +L+AMAI + G+ A SFTG QAG T +G A I V P R
Sbjct: 61 PPEREMDMLMTAGERISMSLLAMAIHAEGSRAHSFTGQQAGFFTDARYGAAHIKAVRPDR 120
Query: 121 LQTALEEGRVVLVAGFQGVSQDTKDVTTLGRGGSDTTAVAMAAALGADVCEIYTDVDGIF 180
++ AL G + +VAGFQG++ D TTLGRGGSDT+AVA+A ALGAD+CEIYTDVDGIF
Sbjct: 121 VKNALSLGDIAIVAGFQGINA-KGDATTLGRGGSDTSAVALAVALGADICEIYTDVDGIF 179
Query: 181 SADPRIVRNARKLDTVTFEEMLEMAACGAKVLMLRCVEYARRHNIPVHVRSSYSDRPGTV 240
+ADPRIV +AR++ ++ +E +LEMA+CG+KVL LRCVEYA+R N+P+HVRSS+S RPGT+
Sbjct: 180 TADPRIVPSARRIPSIDYESILEMASCGSKVLALRCVEYAQRFNMPLHVRSSFSRRPGTL 239
Query: 241 VV 242
VV
Sbjct: 240 VV 241
Lambda K H
0.318 0.134 0.376
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 285
Number of extensions: 8
Number of successful extensions: 2
Number of sequences better than 1.0e-02: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 421
Length of database: 254
Length adjustment: 28
Effective length of query: 393
Effective length of database: 226
Effective search space: 88818
Effective search space used: 88818
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 48 (23.1 bits)
Align aspartate kinase (EC 2.7.2.4) (characterized)
to candidate WP_007051615.1 BL_RS06260 ACT domain-containing protein
Query= BRENDA::P9WPX3
(421 letters)
>NCBI__GCF_000007525.1:WP_007051615.1
Length = 188
Score = 145 bits (365), Expect = 1e-39
Identities = 78/176 (44%), Positives = 113/176 (64%), Gaps = 3/176 (1%)
Query: 247 DVPMEDPILTGVAHDRSEAKVTIVGLPDIPGYAAKVFRAVADADVNIDMVLQNVSKVEDG 306
D+ E P+++G+AHDRSEA T+ G+P+ PG AAKVF +A A VN+DM++Q + V G
Sbjct: 15 DLGPEAPVISGIAHDRSEALATVRGVPNEPGMAAKVFTELATAGVNVDMIVQAGASV--G 72
Query: 307 KTDITFTCSRDVGPAAVEKLDSLRNEIGFSQLLYDDHIGKVSLIGAGMRSHPGVTATFCE 366
DI+FT L + +G+ D ++GKV+++G GM++H G+ A F +
Sbjct: 73 TADISFTVPESAVKQVQNTLLDKQEVLGYHSFDVDTNVGKVAVVGVGMKTHAGLAAKFFQ 132
Query: 367 ALAAVGVNIELISTSEIRISVLCRDTELDKAVVALHEAFGLGGDE-EATVYAGTGR 421
AL+ G+N+ +ISTSEIRI+ L +L+ AV ALH A+GL D+ EA VY GTGR
Sbjct: 133 ALSDEGINVLMISTSEIRIAALVPLDQLNDAVKALHTAYGLDADQIEAVVYGGTGR 188
Lambda K H
0.318 0.134 0.376
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 177
Number of extensions: 11
Number of successful extensions: 5
Number of sequences better than 1.0e-02: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 421
Length of database: 188
Length adjustment: 26
Effective length of query: 395
Effective length of database: 162
Effective search space: 63990
Effective search space used: 63990
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 47 (22.7 bits)
Align candidate WP_007051616.1 BL_RS06265 (aspartate kinase)
to HMM TIGR00657 (aspartate kinase (EC 2.7.2.4))
../bin/blast/fastacmd -i /tmp/list.25821.in -d ../tmp/NCBI__GCF_000007525.1/orgs.faa -p T > /tmp/gapView.25821.genome.faa failed: Inappropriate ioctl for device at ../lib/pbutils.pm line 379.
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