Alignments for a candidate for trpD_1 in Cereibacter sphaeroides ATCC 17029

Align Anthranilate synthase component 2; AS; ASII; Anthranilate synthase, GATase component; Anthranilate synthase, glutamine amidotransferase component; EC 4.1.3.27 (characterized)
to candidate WP_009566395.1 RSPH17029_RS03635 aminodeoxychorismate/anthranilate synthase component II

Query= SwissProt::P26922
         (196 letters)



>NCBI__GCF_000015985.1:WP_009566395.1
          Length = 195

 Score =  276 bits (705), Expect = 2e-79
 Identities = 134/195 (68%), Positives = 153/195 (78%)

Query: 1   MLLLIDNYDSFTYNLVHYLGELGAELDVRRNDSLTVEEAMALRPEGIVLSPGPCDPDKAG 60
           MLLLIDNYDSFTYNLVHYLGELGAE+ VRRND+L V+ AM + P+ IVLSPGPCDP  AG
Sbjct: 1   MLLLIDNYDSFTYNLVHYLGELGAEVVVRRNDALDVQAAMGMHPDAIVLSPGPCDPAAAG 60

Query: 61  ICLPLIDAAAKAAVPLMGVCLGHQAIGQPFGGTVVRAPVPMHGKVDRMFHQGRGVLKDLP 120
           ICLPL  AAA+A +PL+GVCLGHQ IGQ FGG VVR    +HGK+  M H+G+GV   LP
Sbjct: 61  ICLPLTAAAAEARIPLLGVCLGHQTIGQAFGGKVVRCHEIVHGKMGAMHHEGKGVFAGLP 120

Query: 121 SPFRATRYHSLIVERATLPACLEVTGETEDGLIMALSHRELPIHGVQFHPESIESEHGHK 180
           SPF ATRYHSL+VER +LP CLEVT   EDG IM L H+ LPI GVQFHPESI SEHGH+
Sbjct: 121 SPFLATRYHSLVVERDSLPDCLEVTAWLEDGTIMGLRHKSLPIEGVQFHPESIASEHGHQ 180

Query: 181 ILENFLNTTRRLETA 195
           +L  FL++ R   TA
Sbjct: 181 MLRTFLDSARAAVTA 195


Lambda     K      H
   0.321    0.140    0.420 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 206
Number of extensions: 9
Number of successful extensions: 1
Number of sequences better than 1.0e-02: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 196
Length of database: 195
Length adjustment: 20
Effective length of query: 176
Effective length of database: 175
Effective search space:    30800
Effective search space used:    30800
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 44 (21.6 bits)

Align candidate WP_009566395.1 RSPH17029_RS03635 (aminodeoxychorismate/anthranilate synthase component II)
to HMM TIGR00566 (glutamine amidotransferase of anthranilate synthase or aminodeoxychorismate synthase)

Software error:

../bin/blast/fastacmd -i /tmp/list.20272.in -d ../tmp/NCBI__GCF_000015985.1/orgs.faa -p T > /tmp/gapView.20272.genome.faa failed: Inappropriate ioctl for device at ../lib/pbutils.pm line 379.

For help, please send mail to the webmaster (help@microbesonline.org), giving this error message and the time and date of the error.