Align aspartate kinase (EC 2.7.2.4) (characterized)
to candidate WP_011320349.1 AVA_RS18465 aspartate kinase
Query= BRENDA::P74569
(600 letters)
>NCBI__GCF_000204075.1:WP_011320349.1
Length = 604
Score = 808 bits (2086), Expect = 0.0
Identities = 432/604 (71%), Positives = 503/604 (83%), Gaps = 6/604 (0%)
Query: 1 MALIVQKFGGTSVGTVERIQAVAQRIKRTVQGGNSLVVVVSAMGKSTDVLVDLAQQISPN 60
MALIVQKFGG+SVG+VERIQAVAQR+ +TV+ GNSLVVVVSAMGK+TD LV LA +IS N
Sbjct: 1 MALIVQKFGGSSVGSVERIQAVAQRVYKTVKAGNSLVVVVSAMGKTTDGLVKLANEISRN 60
Query: 61 PCRREMDMLLSTGEQVSIALLSLALQEIDQPAISLTGAQVGIVTEAEHSRARILEIRPDR 120
P RREMDMLLSTGEQV+IALLS+ALQE+ QPAIS+TGAQVGIVTEAEH+RARIL I +R
Sbjct: 61 PNRREMDMLLSTGEQVTIALLSMALQELGQPAISMTGAQVGIVTEAEHTRARILHIETER 120
Query: 121 LEHHLREGKVVVVAGFQGISSVEHLEITTLGRGGSDTSAVALAAALKADFCEIYTDVPGI 180
+E H++EGKVVVVAGFQGISS LEITTLGRGGSDTSAVALAAAL+ADFCEIYTDVPGI
Sbjct: 121 VEGHIQEGKVVVVAGFQGISSNGSLEITTLGRGGSDTSAVALAAALQADFCEIYTDVPGI 180
Query: 181 LTTDPRLVPEAQLMAEITCDEMLELASLGAKVLHPRAVEIARNYGIPLVVRSSWSDEPGT 240
LTTDPR+VPEAQLM EITC+EMLELASLGAKVLHPRAVEIARNYG+PLVV+SSW+D+PGT
Sbjct: 181 LTTDPRIVPEAQLMGEITCNEMLELASLGAKVLHPRAVEIARNYGMPLVVKSSWTDDPGT 240
Query: 241 KVVAPPVQNRSLVGLEIAKAVDGVEYDADQAKVALLRVPDRPGVASKLFRDIAQQQVDID 300
V P Q RSL+ LE+A+ VD VE D DQAKVALLRVPD+PGVA+KLF +I++Q+VD+D
Sbjct: 241 WVTTPKPQGRSLINLELARPVDDVELDTDQAKVALLRVPDKPGVAAKLFGEISRQKVDVD 300
Query: 301 LIIQSIHDGNSNDIAFTVVKDLLNTAEAVTSAIAPALR--SYPEADQEAEIIVEKGIAKI 358
LIIQSIH+GNSNDIAFTV +L AEAV +AIAP+LR S+P++D EAE++VE+ IAK+
Sbjct: 301 LIIQSIHEGNSNDIAFTVTTPILKRAEAVAAAIAPSLRSPSHPKSD-EAEVMVEQNIAKV 359
Query: 359 AIAGAGMIGRPGIAAKMFKTLADVGVNIEMISTSEVKVSCVIDQRDADRAIAALSNAFGV 418
+IAGAGMIGRPG+AAKMF TLA+ GVNI+MISTSEVKVSCVID +D DRAI AL AF +
Sbjct: 360 SIAGAGMIGRPGVAAKMFTTLAEAGVNIQMISTSEVKVSCVIDAQDGDRAIIALRKAFEI 419
Query: 419 TL---SPPKNQTDTSHLPAVRGVALDQDQAQIAIRHVPDRPGMAAQLFTALAEANISVDM 475
SP T + P VRGVALD +QA++AIR VPDRPGMAAQLF LA+ NISVDM
Sbjct: 420 ETPLHSPTPPTLSTHNSPPVRGVALDLNQARLAIRQVPDRPGMAAQLFGILAQNNISVDM 479
Query: 476 IIQSQRCRINQGTPCRDIAFMVAEGDSSQAEAILQPLIKDWLDAAIVVNKAIAKVSIVGS 535
IIQSQRCRI G P RDIAF V D A+ +L + + +V++ AIAKVSIVG+
Sbjct: 480 IIQSQRCRIVDGVPRRDIAFTVPRMDGETAQKLLCQVAPELGWGDVVLDSAIAKVSIVGA 539
Query: 536 GMIGHPGVAAHFFAALAQENINIEMIATSEIKISCVVPQDRGVDALKAAHSAFNLAGTKT 595
GM+G PGVAA F ALA+ INI+MIATSEIKISCVV Q++GV AL+ H+AF LAGT+
Sbjct: 540 GMVGQPGVAAKMFEALAKHQINIQMIATSEIKISCVVSQEQGVQALQVIHTAFELAGTEK 599
Query: 596 VTVP 599
VP
Sbjct: 600 FVVP 603
Lambda K H
0.318 0.132 0.366
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 970
Number of extensions: 40
Number of successful extensions: 14
Number of sequences better than 1.0e-02: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 600
Length of database: 604
Length adjustment: 37
Effective length of query: 563
Effective length of database: 567
Effective search space: 319221
Effective search space used: 319221
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 53 (25.0 bits)
Align candidate WP_011320349.1 AVA_RS18465 (aspartate kinase)
to HMM TIGR00656 (aspartate kinase, monofunctional class (EC 2.7.2.4))
../bin/blast/fastacmd -i /tmp/list.24209.in -d ../tmp/orgsDef_201/orgs.faa -p T > /tmp/gapView.24209.genome.faa failed: Inappropriate ioctl for device at ../lib/pbutils.pm line 379.
For help, please send mail to the webmaster (help@microbesonline.org), giving this error message and the time and date of the error.