Align acetohydroxyacid synthase subunit B (EC 2.2.1.6) (characterized)
to candidate WP_043828033.1 RSPH17029_RS06560 acetolactate synthase 3 large subunit
Query= metacyc::MONOMER-18810
(585 letters)
>NCBI__GCF_000015985.1:WP_043828033.1
Length = 584
Score = 597 bits (1538), Expect = e-175
Identities = 300/566 (53%), Positives = 400/566 (70%), Gaps = 5/566 (0%)
Query: 19 MIGAEILVHALAEEGVEYVWGYPGGAVLYIYDELHKQTKFEHILVRHEQAAVHAADGYAR 78
M GA ++V AL ++GV+ V+GYPGGAVL IYDE+ +Q HILVRHEQ AVH A+GYAR
Sbjct: 5 MSGARMVVQALKDQGVDTVFGYPGGAVLPIYDEIFQQNDIRHILVRHEQGAVHMAEGYAR 64
Query: 79 ATGKVGVALVTSGPGVTNAVTGIATAYLDSIPMVVITGNVPTHAIGQDAFQECDTVGITR 138
+TGK GV LVTSGPG TNAVTG+ A +DSIP+VV++G VPT IG D FQE DTVGITR
Sbjct: 65 STGKPGVVLVTSGPGATNAVTGLVDALMDSIPLVVLSGQVPTFMIGTDGFQEADTVGITR 124
Query: 139 PIVKHNFLVKDVRDLAATIKKAFFIAATGRPGPVVVDIPKDVSRNACKYEYPKSIDMRSY 198
P KHN+LVKD LA TI +AF +A GRPGPV+VDIPKDV Y+ P+ + Y
Sbjct: 125 PCTKHNWLVKDTARLAETIHQAFHVATHGRPGPVLVDIPKDVQFATATYQPPQKARVDHY 184
Query: 199 NPVNKGHSGQIRKAVALLQGAERPYIYTGGGVVLAN--ASDELRQLAALTGHPVTNTLMG 256
P KG I + V L++ AERP YTGGGV+ + A+ LR+ TG P+T+TLMG
Sbjct: 185 QPKVKGDIETITRMVELIETAERPVFYTGGGVINSGSAANQLLREFVDATGFPITSTLMG 244
Query: 257 LGAFPGTSKQFVGMLGMHGTYEANMAMQNCDVLIAIGARFDDRVIGNPAHFTSQARKIIH 316
LGA+P + K ++GMLGMHG YEAN+AM CD++I +GARFDDR+ G F+ ++K +H
Sbjct: 245 LGAYPASGKGWLGMLGMHGLYEANLAMHGCDLMINVGARFDDRITGRVKDFSPFSQK-VH 303
Query: 317 IDIDPSSISKRVKVDIPIVGNVKDVLQELIAQIKASDIKPKREALAKWWEQIEQWRSVDC 376
IDIDPSSI+K ++ D+PI+G+V VL++ + K+ K REALA WW+QI +W++V+C
Sbjct: 304 IDIDPSSINKVIRADVPIIGDVGHVLEDALRLWKSRGRKVNREALADWWKQIAEWKAVNC 363
Query: 377 LKYDRSSEIIKPQYVVEKIWELTKG-DAFICSDVGQHQMWAAQFYKFDEPRRWINSGGLG 435
L Y SS++IKPQ+ ++++ LTKG D +I ++VGQHQMWAAQF F+ P RW+ SGGLG
Sbjct: 364 LDYTPSSKLIKPQHALQRLEALTKGMDRYITTEVGQHQMWAAQFLGFEGPNRWMTSGGLG 423
Query: 436 TMGVGLPYAMGIKKAFPEKEVVTITGEGSIQMCIQELSTCLQYDTPVKICSLNNGYLGMV 495
TMG GLP ++G++ A PE V+ I G+ S M +QE+ T +Q+ PVK LNN LGMV
Sbjct: 424 TMGYGLPASIGVQVAHPEALVINIAGDASFLMNMQEIGTAMQFRLPVKQFILNNERLGMV 483
Query: 496 RQWQEIEYDNRYSHSYMDALPDFVKLAEAYGHVGMRVEKTSDVEPALREAFRLKDRTVFL 555
RQWQ++ + RYS S+ ++LPDFVKLAEA+G G++ +D++ A+RE D V
Sbjct: 484 RQWQQLLHGQRYSQSWSESLPDFVKLAEAFGAKGIQCADPADLDDAIREMIAY-DGPVVF 542
Query: 556 DFQTDPTENVWPMVQAGKGISEMLLG 581
D + EN +PM+ +G+ +EMLLG
Sbjct: 543 DCLVEKHENCFPMIPSGRPHNEMLLG 568
Lambda K H
0.319 0.135 0.407
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 933
Number of extensions: 35
Number of successful extensions: 5
Number of sequences better than 1.0e-02: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 585
Length of database: 584
Length adjustment: 37
Effective length of query: 548
Effective length of database: 547
Effective search space: 299756
Effective search space used: 299756
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 53 (25.0 bits)
Align candidate WP_043828033.1 RSPH17029_RS06560 (acetolactate synthase 3 large subunit)
to HMM TIGR00118 (ilvB: acetolactate synthase, large subunit, biosynthetic type (EC 2.2.1.6))
../bin/blast/fastacmd -i /tmp/list.15088.in -d ../tmp/NCBI__GCF_000015985.1/orgs.faa -p T > /tmp/gapView.15088.genome.faa failed: Inappropriate ioctl for device at ../lib/pbutils.pm line 379.
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