Alignments for a candidate for hisE in Echinicola vietnamensis KMM 6221, DSM 17526

Align putative bifunctional phosphoribosyl-AMP cyclohydrolase/phosphoribosyl-ATP pyrophosphatase (EC 3.5.4.19; EC 3.6.1.31) (characterized)
to candidate Echvi_2517 Echvi_2517 phosphoribosyl-ATP pyrophosphohydrolase

Query= metacyc::HISTCYCLOPRATPPHOS
         (203 letters)



>FitnessBrowser__Cola:Echvi_2517
          Length = 201

 Score =  211 bits (536), Expect = 9e-60
 Identities = 103/196 (52%), Positives = 140/196 (71%), Gaps = 1/196 (0%)

Query: 9   ELDWEKTDGLMPVIVQHAVSGEVLMLGYMNPEALDKTLESGKVTFFSRTKQRLWTKGETS 68
           ++D++K +GL+P I+Q A +  VLMLGYMN EAL KT ESGKVTFFSRTKQRLWTKGETS
Sbjct: 5   KIDFDKVNGLVPAIIQDATTNAVLMLGYMNEEALQKTQESGKVTFFSRTKQRLWTKGETS 64

Query: 69  GNFLNVVSIAPDCDNDTLLVLANPIGPTCHKGTSSCFGD-TAHQWLFLYQLEQLLAERKS 127
           GNF++V SI  DCDNDTLL+ A+P+GP CH G  +CF +    +  F+ QL  ++ +RK+
Sbjct: 65  GNFMHVQSIKVDCDNDTLLIKADPVGPVCHTGADTCFDEKNTSKTAFIDQLRSIIKDRKN 124

Query: 128 ADPETSYTAKLYASGTKRIAQKVGEEGVETALAATVHDRFELTNEASDLMYHLLVLLQDQ 187
              + SYTA L+A G  ++AQKVGEE VE  + A    +     EA+DL++H LVLL+ +
Sbjct: 125 NPTDKSYTASLFAKGINKVAQKVGEEAVEIVIEAKDDHKDLFMGEAADLLFHYLVLLEAK 184

Query: 188 GLDLTTVIENLRKRHQ 203
           G +L  V++ L +RH+
Sbjct: 185 GYELDEVMDVLIQRHK 200


Lambda     K      H
   0.317    0.132    0.384 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 131
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 1.0e-02: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 203
Length of database: 201
Length adjustment: 21
Effective length of query: 182
Effective length of database: 180
Effective search space:    32760
Effective search space used:    32760
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 45 (21.9 bits)

Align candidate Echvi_2517 Echvi_2517 (phosphoribosyl-ATP pyrophosphohydrolase)
to HMM PF01502 (PRA-CH)

Software error:

../bin/blast/fastacmd -i /tmp/list.3314.in -d ../tmp/orgsDef_201/orgs.faa -p T > /tmp/gapView.3314.genome.faa failed: Inappropriate ioctl for device at ../lib/pbutils.pm line 379.

For help, please send mail to the webmaster (help@microbesonline.org), giving this error message and the time and date of the error.