Align gamma-glutamylphosphate reductase (EC 1.2.1.41) (characterized)
to candidate Echvi_2633 Echvi_2633 gamma-glutamyl phosphate reductase
Query= reanno::Cola:Echvi_2633
(399 letters)
>FitnessBrowser__Cola:Echvi_2633
Length = 399
Score = 780 bits (2014), Expect = 0.0
Identities = 399/399 (100%), Positives = 399/399 (100%)
Query: 1 MKILSTQKKNDVLASMIKIIDKNREKILTANKADLDAFQRDDQALYDRLVVNDAKIDGMI 60
MKILSTQKKNDVLASMIKIIDKNREKILTANKADLDAFQRDDQALYDRLVVNDAKIDGMI
Sbjct: 1 MKILSTQKKNDVLASMIKIIDKNREKILTANKADLDAFQRDDQALYDRLVVNDAKIDGMI 60
Query: 61 QAVQEVKDQDDPVGKEISKRTLANGLDITNKTAPFGTIMIIYESRPDVTIEAAVLAFKAN 120
QAVQEVKDQDDPVGKEISKRTLANGLDITNKTAPFGTIMIIYESRPDVTIEAAVLAFKAN
Sbjct: 61 QAVQEVKDQDDPVGKEISKRTLANGLDITNKTAPFGTIMIIYESRPDVTIEAAVLAFKAN 120
Query: 121 SKILLKGGKEAVNSNKVLVECWHEALEENGLSKDWIELFTLNREQTQAFLKNPSEKLDLI 180
SKILLKGGKEAVNSNKVLVECWHEALEENGLSKDWIELFTLNREQTQAFLKNPSEKLDLI
Sbjct: 121 SKILLKGGKEAVNSNKVLVECWHEALEENGLSKDWIELFTLNREQTQAFLKNPSEKLDLI 180
Query: 181 VPRGGERLIAFVKEHAQCAVLVSGRGNNFAYVAEDADWELAKKVIINAKTNKISGCNALD 240
VPRGGERLIAFVKEHAQCAVLVSGRGNNFAYVAEDADWELAKKVIINAKTNKISGCNALD
Sbjct: 181 VPRGGERLIAFVKEHAQCAVLVSGRGNNFAYVAEDADWELAKKVIINAKTNKISGCNALD 240
Query: 241 KILVDEKLPDFESKLADLAKSLASYKVELVAEKELVPAIEGAKEVPSEDTWYEEFLALKA 300
KILVDEKLPDFESKLADLAKSLASYKVELVAEKELVPAIEGAKEVPSEDTWYEEFLALKA
Sbjct: 241 KILVDEKLPDFESKLADLAKSLASYKVELVAEKELVPAIEGAKEVPSEDTWYEEFLALKA 300
Query: 301 LIGKVNGLDEAIAKINKYSGGHSATILTTDKDKAATFMEQVDSAAVYHNASTRFTDGGQM 360
LIGKVNGLDEAIAKINKYSGGHSATILTTDKDKAATFMEQVDSAAVYHNASTRFTDGGQM
Sbjct: 301 LIGKVNGLDEAIAKINKYSGGHSATILTTDKDKAATFMEQVDSAAVYHNASTRFTDGGQM 360
Query: 361 GVGAELAISTDKLHHRGPLGLEQLVTNKYYVFGSGQIRD 399
GVGAELAISTDKLHHRGPLGLEQLVTNKYYVFGSGQIRD
Sbjct: 361 GVGAELAISTDKLHHRGPLGLEQLVTNKYYVFGSGQIRD 399
Lambda K H
0.314 0.132 0.367
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 767
Number of extensions: 33
Number of successful extensions: 1
Number of sequences better than 1.0e-02: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 399
Length of database: 399
Length adjustment: 31
Effective length of query: 368
Effective length of database: 368
Effective search space: 135424
Effective search space used: 135424
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (22.0 bits)
S2: 50 (23.9 bits)
Align candidate Echvi_2633 Echvi_2633 (gamma-glutamyl phosphate reductase)
to HMM TIGR00407 (proA: glutamate-5-semialdehyde dehydrogenase (EC 1.2.1.41))
../bin/blast/fastacmd -i /tmp/list.26939.in -d ../tmp/orgsDef_201/orgs.faa -p T > /tmp/gapView.26939.genome.faa failed: Inappropriate ioctl for device at ../lib/pbutils.pm line 379.
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