Align glutamate 5-kinase (EC 2.7.2.11) (characterized)
to candidate Echvi_4033 Echvi_4033 glutamate 5-kinase
Query= reanno::Cola:Echvi_4033 (362 letters) >FitnessBrowser__Cola:Echvi_4033 Length = 362 Score = 710 bits (1832), Expect = 0.0 Identities = 362/362 (100%), Positives = 362/362 (100%) Query: 1 MIHRKANTIVIKIGSNVLTQADGTPDTMRMKALVRQMVYLREQGQEIVLITSGAVAYGRT 60 MIHRKANTIVIKIGSNVLTQADGTPDTMRMKALVRQMVYLREQGQEIVLITSGAVAYGRT Sbjct: 1 MIHRKANTIVIKIGSNVLTQADGTPDTMRMKALVRQMVYLREQGQEIVLITSGAVAYGRT 60 Query: 61 STVFEEKTDPVIQKQILAAVGQIELIRQYKQLFGDHNTPIAQIMVTKSDFRDRKHFLNMK 120 STVFEEKTDPVIQKQILAAVGQIELIRQYKQLFGDHNTPIAQIMVTKSDFRDRKHFLNMK Sbjct: 61 STVFEEKTDPVIQKQILAAVGQIELIRQYKQLFGDHNTPIAQIMVTKSDFRDRKHFLNMK 120 Query: 121 NCLEGLLKNNIIPVINENDTVSVTELMFTDNDELAGLVAAMLDAKDLIILSNVEGIFKGH 180 NCLEGLLKNNIIPVINENDTVSVTELMFTDNDELAGLVAAMLDAKDLIILSNVEGIFKGH Sbjct: 121 NCLEGLLKNNIIPVINENDTVSVTELMFTDNDELAGLVAAMLDAKDLIILSNVEGIFKGH 180 Query: 181 PSDPEAVLIEKVDADTPSMANFISSSKSSFGRGGMLTKMNMAKKSADLGIGVTIANGKRE 240 PSDPEAVLIEKVDADTPSMANFISSSKSSFGRGGMLTKMNMAKKSADLGIGVTIANGKRE Sbjct: 181 PSDPEAVLIEKVDADTPSMANFISSSKSSFGRGGMLTKMNMAKKSADLGIGVTIANGKRE 240 Query: 241 DVLVDYFHNRLRCTYFEPSKAKQSPKKWIAHSEHYSTGEVIINSGAENALRSDKITSLLP 300 DVLVDYFHNRLRCTYFEPSKAKQSPKKWIAHSEHYSTGEVIINSGAENALRSDKITSLLP Sbjct: 241 DVLVDYFHNRLRCTYFEPSKAKQSPKKWIAHSEHYSTGEVIINSGAENALRSDKITSLLP 300 Query: 301 IGVLEIRGDFSKGDIIRILSEDGRKIGLGKSAYGAKVAAEKKGLSNQKPLIHYDYLYLHQ 360 IGVLEIRGDFSKGDIIRILSEDGRKIGLGKSAYGAKVAAEKKGLSNQKPLIHYDYLYLHQ Sbjct: 301 IGVLEIRGDFSKGDIIRILSEDGRKIGLGKSAYGAKVAAEKKGLSNQKPLIHYDYLYLHQ 360 Query: 361 DS 362 DS Sbjct: 361 DS 362 Lambda K H 0.317 0.134 0.374 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 1 Number of Hits to DB: 564 Number of extensions: 7 Number of successful extensions: 1 Number of sequences better than 1.0e-02: 1 Number of HSP's gapped: 1 Number of HSP's successfully gapped: 1 Length of query: 362 Length of database: 362 Length adjustment: 29 Effective length of query: 333 Effective length of database: 333 Effective search space: 110889 Effective search space used: 110889 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits) S2: 49 (23.5 bits)
Align candidate Echvi_4033 Echvi_4033 (glutamate 5-kinase)
to HMM TIGR01027 (proB: glutamate 5-kinase (EC 2.7.2.11))
../bin/blast/fastacmd -i /tmp/list.6256.in -d ../tmp/orgsDef_201/orgs.faa -p T > /tmp/gapView.6256.genome.faa failed: Inappropriate ioctl for device at ../lib/pbutils.pm line 379.
For help, please send mail to the webmaster (help@microbesonline.org), giving this error message and the time and date of the error.