PaperBLAST – Find papers about a protein or its homologs

 

Curated BLAST for Genomes

Searching in Dechlorosoma suillum PS (PS)

Found 3 curated entries in PaperBLAST's database that match 'perchlorate'.

These curated entries have 3 distinct sequences.

Running ublast with E ≤ 0.01

Found 4 relevant proteins in Dechlorosoma suillum PS, or try another query

Dsui_0148: DMSO reductase family type II enzyme, iron-sulfur subunit
is similar to:
PaperBLAST

PCRB_DECAR / Q47CW7: Perchlorate reductase subunit beta; Perchlorate reductase iron-sulfur subunit from Dechloromonas aromatica

95% id,
100% cov

Dsui_0147: hypothetical protein
is similar to:
PaperBLAST

PCRC_DECAR / Q47CW8: Perchlorate reductase subunit gamma; Perchlorate reductase heme subunit from Dechloromonas aromatica

89% id,
100% cov

Dsui_0149: DMSO reductase family type II enzyme, molybdopterin subunit
is similar to:
PaperBLAST

PCRA_DECAR / Q47CW6: Perchlorate reductase subunit alpha; EC 1.97.1.-; Perchlorate reductase molybdenum subunit from Dechloromonas aromatica

88% id,
100% cov

Dsui_2508: Fe-S-cluster-containing hydrogenase subunit
is similar to:
PaperBLAST

PCRB_DECAR / Q47CW7: Perchlorate reductase subunit beta; Perchlorate reductase iron-sulfur subunit from Dechloromonas aromatica

43% id,
38% cov

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 4 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory