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Align J2KV33 to PF01169 (UPF0016)

J2KV33 has 250 amino acids

Query:       UPF0016  [M=75]
Accession:   PF01169.23
Description: Uncharacterized protein family UPF0016
Scores for complete sequences (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Sequence Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    5.7e-08   19.4  23.6    3.3e-07   16.9   7.0    3.0  3  J2KV33    


Domain annotation for each sequence (and alignments):
>> J2KV33  
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   16.9   7.0   3.3e-07   3.3e-07      20      75 .]      27      83 ..       8      83 .. 0.90
   2 !   11.9   3.7   1.2e-05   1.2e-05      18      75 .]     144     201 ..     142     201 .. 0.86
   3 ?   -3.1   0.1      0.59      0.59      65      72 ..     226     233 ..     217     237 .. 0.52

  Alignments for each domain:
  == domain 1  score: 16.9 bits;  conditional E-value: 3.3e-07
  UPF0016 20 tiaLAary..kplaVflGatlAlalatllavllGsllakrlperlvklvaavlFlvfG 75
             ti+LA+    ++ + f+G+ lAl +  +l  ++G+ll   +p +++++  + l+++fG
   J2KV33 27 TIILAVGVtqSWRPAFIGTGLALSVLAVLVLIFGPLL-GLIPIDILQFTIGTLLILFG 83
             67777766647888***********************.*******************9 PP

  == domain 2  score: 11.9 bits;  conditional E-value: 1.2e-05
  UPF0016  18 latiaLAarykpla.VflGatlAlalatllavllGsllakrlperlvklvaavlFlvfG 75 
              +++ia +ar  +l+   lGa++A +++ +++ l+ + l + +pe+++k+++++l+ +fG
   J2KV33 144 FIVIATGARPGMLPyAGLGALIACIAVLVIGLLVHKPL-SSVPENTLKFIVGLLLTAFG 201
              556666666655556899****************9999.99*****************8 PP

  == domain 3  score: -3.1 bits;  conditional E-value: 0.59
  UPF0016  65 lvaavlFl 72 
              l+aa++F+
   J2KV33 226 LLAAFSFI 233
              33333333 PP



Or compare J2KV33 to CDD or PaperBLAST