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Align VIMSS52637 to PF01169 (UPF0016)

VIMSS52637 has 200 amino acids

Query:       UPF0016  [M=75]
Accession:   PF01169.19
Description: Uncharacterized protein family UPF0016
Scores for complete sequences (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Sequence   Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    2.5e-45  139.1  16.3    7.7e-25   73.4   3.1    2.1  2  VIMSS52637  


Domain annotation for each sequence (and alignments):
>> VIMSS52637  
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   73.4   3.1   7.7e-25   7.7e-25       3      75 .]      23      96 ..      21      96 .. 0.97
   2 !   71.6   5.4   2.8e-24   2.8e-24       2      75 .]     119     194 ..     118     194 .. 0.95

  Alignments for each domain:
  == domain 1  score: 73.4 bits;  conditional E-value: 7.7e-25
     UPF0016  3 aflliflaElGDkTqlaaalLaary.kplpVflGavlAlalmtvlsvllGsslakrlperlielvaavlFllfG 75
                ++++++laE+GDkTql+ +lLa+ry kp+p++++++lA++++++l+++lG  +a++l+++++++v +v+Fl+++
  VIMSS52637 23 SITTVALAEIGDKTQLLSLLLASRYrKPIPIIAAIFLATLANHALAAWLGVVVADYLSPDILKWVLVVSFLAMA 96
                7899*******************************************************************986 PP

  == domain 2  score: 71.6 bits;  conditional E-value: 2.8e-24
     UPF0016   2 aaflliflaElGDkTqlaaalLaary.kplp.VflGavlAlalmtvlsvllGsslakrlperlielvaavlFllfG 75 
                 a+f+++f+aE+GDkTq+a+ +L+a+y ++l+ V++G++l+++l++v++vl+G+  a+++p  li+ v+a lFll++
  VIMSS52637 119 ASFIAFFMAEIGDKTQIATSILGAQYaDALSwVIVGTTLGMLLANVPVVLIGKLSADKMPLGLIRKVTAGLFLLMA 194
                 89************************966667*****************************************996 PP



Or compare VIMSS52637 to CDD or PaperBLAST