D4GYB0 has 208 amino acids
Query: UPF0020 [M=197]
Accession: PF01170.22
Description: Putative RNA methylase family UPF0020
Scores for complete sequences (score includes all domains):
--- full sequence --- --- best 1 domain --- -#dom-
E-value score bias E-value score bias exp N Sequence Description
------- ------ ----- ------- ------ ----- ---- -- -------- -----------
2.2e-13 36.4 0.1 1.2e-12 34.1 0.1 1.9 1 D4GYB0
Domain annotation for each sequence (and alignments):
>> D4GYB0
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ! 34.1 0.1 1.2e-12 1.2e-12 49 152 .. 69 149 .. 24 166 .. 0.81
Alignments for each domain:
== domain 1 score: 34.1 bits; conditional E-value: 1.2e-12
UPF0020 49 lganiapgllrefvyelkaeaeeearaelklygsDldrrvvqgareNaekagvgdliefsqadaakLr..lkegevdvivtnpPYGerlgskkalekLYsef 148
+ ++++g++ld ++++a +Na++ g + i++ ada+ L+ l+++ +++ npP+G g+++a +++ +++
D4GYB0 69 RS-------------------------PARVVGVELDDDALATATDNARRVGASAPIDWIRADATRLPlcLPDDRQVTVLMNPPFGAQRGNEHADRAFLDSV 145
33.........................34569************************************9977777779************999998887777 PP
UPF0020 149 lrel 152
++ +
D4GYB0 146 ASVA 149
6665 PP
Or compare D4GYB0 to CDD or PaperBLAST