NP_001026882.2 has 463 amino acids
Query: UPF0020 [M=197]
Accession: PF01170.22
Description: Putative RNA methylase family UPF0020
Scores for complete sequences (score includes all domains):
--- full sequence --- --- best 1 domain --- -#dom-
E-value score bias E-value score bias exp N Sequence Description
------- ------ ----- ------- ------ ----- ---- -- -------- -----------
2.8e-16 45.9 0.0 6.1e-16 44.8 0.0 1.5 1 NP_001026882.2
Domain annotation for each sequence (and alignments):
>> NP_001026882.2
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ! 44.8 0.0 6.1e-16 6.1e-16 3 140 .. 190 320 .. 189 326 .. 0.85
Alignments for each domain:
== domain 1 score: 44.8 bits; conditional E-value: 6.1e-16
UPF0020 3 yRvfngpapLketLAaalvrlagwkdgepllDPmCGsGtilIEaallganiapgllrefvyelkaeaeeearaelklygsDldrrvvqgareNae 97
+R+f g++++ + L+ + + ++k+++ +DP+ G+G++lI a ga+++ + y+ + + +++r+++k +g D + r N++
NP_001026882.2 190 KRHFIGNTSMDAGLSFIMANHGKVKENDIVFDPFVGTGGLLIACAHFGAYVY---GTDIDYNTVHGLGKATRKNQKWRGPDENI------RANLR 275
79**************************************************...56678888889999999999******876......57999 PP
UPF0020 98 kagvgdl.iefsqadaakLr.lkegevdvivtnpPYGerlgskka 140
++g+++ ++ + da k +k +d+i+t+pPYG+r ++ ++
NP_001026882.2 276 QYGLEKYyLDVLVSDASKPSwRKGTYFDAIITDPPYGIRESTRRT 320
99999852455555666555435559*************888765 PP
Or compare NP_001026882.2 to CDD or PaperBLAST