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Align NP_015168.1 to PF01170 (UPF0020)

NP_015168.1 has 315 amino acids

Query:       UPF0020  [M=197]
Accession:   PF01170.18
Description: Putative RNA methylase family UPF0020
Scores for complete sequences (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Sequence    Description
    ------- ------ -----    ------- ------ -----   ---- --  --------    -----------
    3.1e-10   26.2   0.1      4e-09   22.6   0.1    2.2  1  NP_015168.1  


Domain annotation for each sequence (and alignments):
>> NP_015168.1  
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   22.6   0.1     4e-09     4e-09      30     132 ..      99     179 ..      81     231 .. 0.83

  Alignments for each domain:
  == domain 1  score: 22.6 bits;  conditional E-value: 4e-09
                  S-EEETT-TTSHHHHHHHHHHTT--TTTT----SSHHHHHHHHHHHH--EEEEES-HHHHHHHHHHHHHTT-GGGEEEEE--GGG--....STTS--- CS
      UPF0020  30 epllDPmCGsGtilIEaallganiapgllrefvlelkaeaeeearaelklygsDldrrvvqgareNaekagvgdliefsqadaakLr....lkegevd 123
                  e++lD +CG+G+  I  a++  +++                          g+D   +++ ++ +Na+++gv+d+i ++    +kL     l++ ++d
  NP_015168.1  99 ERILDVFCGGGGNTIQFAMQFPYVY--------------------------GVDYSIEHIYCTAKNAQSYGVDDRIWLKRGSWKKLVskqkLSKIKYD 170
                  5566666666666666666666665..........................***********************************9777555669** PP

                  EEEE----- CS
      UPF0020 124 vivtnpPYG 132
                   + + pP+G
  NP_015168.1 171 CVFGSPPWG 179
                  ********9 PP



Or compare NP_015168.1 to CDD or PaperBLAST