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Align NP_079107.6 to PF01170 (UPF0020)

NP_079107.6 has 853 amino acids

Query:       UPF0020  [M=197]
Accession:   PF01170.18
Description: Putative RNA methylase family UPF0020
Scores for complete sequences (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Sequence    Description
    ------- ------ -----    ------- ------ -----   ---- --  --------    -----------
    4.3e-10   25.7   0.0    1.6e-09   23.9   0.0    1.8  1  NP_079107.6  


Domain annotation for each sequence (and alignments):
>> NP_079107.6  
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   23.9   0.0   1.6e-09   1.6e-09      48     132 ..     710     767 ..     677     769 .. 0.83

  Alignments for each domain:
  == domain 1  score: 23.9 bits;  conditional E-value: 1.6e-09
                  HHHTT--TTTT----SSHHHHHHHHHHHH--EEEEES-HHHHHHHHHHHHHTT-GGGEEEEE--GGG--STTS---EEEE----- CS
      UPF0020  48 llganiapgllrefvlelkaeaeeearaelklygsDldrrvvqgareNaekagvgdliefsqadaakLrlkegevdvivtnpPYG 132
                  l g                           +++++D+d+  ++ ar+Nae +g++d+ief + d+  L  +  + dv+   pP+G
  NP_079107.6 710 LTGM--------------------------RVIAIDIDPVKIALARNNAEVYGIADKIEFICGDFLLLA-SFLKADVVFLSPPWG 767
                  4444..........................4669********************************999.9999**********9 PP



Or compare NP_079107.6 to CDD or PaperBLAST