NP_473430.3 has 853 amino acids
Query: UPF0020 [M=197]
Accession: PF01170.22
Description: Putative RNA methylase family UPF0020
Scores for complete sequences (score includes all domains):
--- full sequence --- --- best 1 domain --- -#dom-
E-value score bias E-value score bias exp N Sequence Description
------- ------ ----- ------- ------ ----- ---- -- -------- -----------
3.3e-10 26.1 0.0 1.6e-09 23.9 0.0 2.1 1 NP_473430.3
Domain annotation for each sequence (and alignments):
>> NP_473430.3
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ! 23.9 0.0 1.6e-09 1.6e-09 30 132 .. 684 759 .. 667 761 .. 0.85
Alignments for each domain:
== domain 1 score: 23.9 bits; conditional E-value: 1.6e-09
UPF0020 30 epllDPmCGsGtilIEaallganiapgllrefvyelkaeaeeearaelklygsDldrrvvqgareNaekagvgdliefsqadaakLrlkegevdvivt 127
++ +D +CG G+ I al g++++ ++D+d+ ++ ar+Nae +g++d+ief + d+ L + + dv+
NP_473430.3 684 DVVVDAFCGVGGNTIQFALTGKRVI--------------------------AIDIDPVKIDLARNNAEVYGIADKIEFICGDFLLLA-PCLKADVVFL 754
5566667777777777777776666..........................9********************************999.88899***** PP
UPF0020 128 npPYG 132
pP+G
NP_473430.3 755 SPPWG 759
****9 PP
Or compare NP_473430.3 to CDD or PaperBLAST