P45253 has 292 amino acids
Query: UPF0020 [M=197]
Accession: PF01170.22
Description: Putative RNA methylase family UPF0020
Scores for complete sequences (score includes all domains):
--- full sequence --- --- best 1 domain --- -#dom-
E-value score bias E-value score bias exp N Sequence Description
------- ------ ----- ------- ------ ----- ---- -- -------- -----------
5.1e-11 28.7 0.0 1.4e-10 27.3 0.0 1.7 2 P45253
Domain annotation for each sequence (and alignments):
>> P45253
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ! 27.3 0.0 1.4e-10 1.4e-10 72 135 .. 146 205 .. 101 214 .. 0.74
2 ? -3.2 0.0 0.31 0.31 52 186 .. 259 275 .. 246 285 .. 0.50
Alignments for each domain:
== domain 1 score: 27.3 bits; conditional E-value: 1.4e-10
UPF0020 72 earaelklygsDldrrvvqgareNaekagvgdliefsqadaakLrlkegevdvivtnpPYGerl 135
+ + l+++g+Dl + vv+ a++Nae+ +++ + +s + + +++ g++d+iv+npPY ++
P45253 146 KRHIPLEIIGVDLMSDVVALAQSNAERNQLNVEFLQSRW-FDNIT---GKFDLIVSNPPYIDAQ 205
3334567***********************999888886.56677...88**********7765 PP
== domain 2 score: -3.2 bits; conditional E-value: 0.31
UPF0020 52 niapgllrefvyelkaeaeeearaelklygsDldrrvvqgareNaekagvgdliefsqadaakLrlkegevdvivtnpPYGerlgskkalekLYseflrelk 153
+
P45253 259 EK---------------------------------------------------------------------------------------------------- 260
33.................................................................................................... PP
UPF0020 154 rvlrgggrlvlltaenkalekaleeralrkvke 186
+ ++++e+++++v+
P45253 261 ------------------VRSIFQENHWEMVET 275
..................334444444444444 PP
Or compare P45253 to CDD or PaperBLAST