REBASE::BaeI has 626 amino acids
Query: UPF0020 [M=197]
Accession: PF01170.22
Description: Putative RNA methylase family UPF0020
Scores for complete sequences (score includes all domains):
--- full sequence --- --- best 1 domain --- -#dom-
E-value score bias E-value score bias exp N Sequence Description
------- ------ ----- ------- ------ ----- ---- -- -------- -----------
4.6e-14 38.7 0.0 1.4e-13 37.1 0.0 1.8 1 REBASE::BaeI
Domain annotation for each sequence (and alignments):
>> REBASE::BaeI
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ! 37.1 0.0 1.4e-13 1.4e-13 21 134 .. 317 441 .. 314 454 .. 0.71
Alignments for each domain:
== domain 1 score: 37.1 bits; conditional E-value: 1.4e-13
UPF0020 21 vrlagwkdgepllDPmCGsGtilIEaallganiapgllrefvyelkaeaeeear.aelklygsDldrrvvqgareN..aekagvgdliefsqad.aa 113
v++ + +++e +lDP CG+G++l+ a ++n l + + + + ++++ a kl+g+D+++ +v+ a+ +e+ g +++ +++++d +
REBASE::BaeI 317 VKMIKPRQDEIILDPACGTGGFLVAAMKYVENSLSDLKKARPVD-FE--KAKTDfALRKLRGIDFNPDLVRVAKMRmiLEEDGHTGIFHANSLDsFE 410
56777899****************99999999995444333322.12..2222246667*************9876335777777777766665233 PP
UPF0020 114 kLr..........lkegevdvivtnpPYGer 134
k++ +e++vd+i+tnpP+G++
REBASE::BaeI 411 KIKqsallsgannIEENSVDIILTNPPFGKK 441
44444444687765677************96 PP
Or compare REBASE::BaeI to CDD or PaperBLAST