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Align REBASE::M.Aap10433I to PF01170 (UPF0020)

REBASE::M.Aap10433I has 515 amino acids

Query:       UPF0020  [M=197]
Accession:   PF01170.18
Description: Putative RNA methylase family UPF0020
Scores for complete sequences (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Sequence            Description
    ------- ------ -----    ------- ------ -----   ---- --  --------            -----------
    1.6e-10   27.1   0.0    3.6e-10   26.0   0.0    1.5  1  REBASE::M.Aap10433I  


Domain annotation for each sequence (and alignments):
>> REBASE::M.Aap10433I  
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   26.0   0.0   3.6e-10   3.6e-10      18     173 ..     170     331 ..     166     344 .. 0.81

  Alignments for each domain:
  == domain 1  score: 26.0 bits;  conditional E-value: 3.6e-10
                          HHHHHHTT--TTS-EEETT-TTSHHHHHHHHHHTT--TTTT----SSHHHHHHHHHHHH--EEEEES-HHHHHHHHHHHHHTT-GGGEEE CS
              UPF0020  18 aalvrlagwkpgepllDPmCGsGtilIEaallganiapgllrefvlelkaeaeeearaelklygsDldrrvvqgareNaekagvgdlief 107
                            +vr  + +p e+++DP  G+ ++lI a +  ++   g + +  +e     e++++ +  ++g++l ++  + a  N     +++  + 
  REBASE::M.Aap10433I 170 NTMVRCIKPQPKETIQDPAAGTAGFLIAADQYMRKQT-GDYMDISFE-----EQQFQSKHAFVGVELVPNTRRLALMNCLLHDIEGGPQG 253
                          5799***********************9988888888.555343333.....445557777*****************999999999998 PP

                          EE--GGG--...STTS---EEEE----------HHHH..HHHHH.......HHHHHHHHH-TT..-EEEEEESSHHHH CS
              UPF0020 108 sqadaakLr...lkegevdvivtnpPYGerlgskkal..ekLYs.......eflrelkrvlrgggrlvlltsenkale 173
                           +++   L    ++ ++ d+i++npP+G + g   a+  ++L+        +fl+ + r+l++ggr+++++++n  +e
  REBASE::M.Aap10433I 254 AVLQGNTLGetgKRLKSADIILANPPFGTSKGGDAAItrDDLTYettnkqlAFLQHIYRNLKEGGRAAVVLPDNVLFE 331
                          88888888866655559*************999888866778641222333588999999**********99998887 PP



Or compare REBASE::M.Aap10433I to CDD or PaperBLAST