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Align REBASE::M.Aba0088I to PF01170 (UPF0020)

REBASE::M.Aba0088I has 493 amino acids

Query:       UPF0020  [M=197]
Accession:   PF01170.18
Description: Putative RNA methylase family UPF0020
Scores for complete sequences (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Sequence           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------           -----------
    5.1e-13   35.3   0.0    9.4e-13   34.4   0.0    1.4  1  REBASE::M.Aba0088I  


Domain annotation for each sequence (and alignments):
>> REBASE::M.Aba0088I  
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   34.4   0.0   9.4e-13   9.4e-13      19     143 ..     172     291 ..     167     351 .. 0.69

  Alignments for each domain:
  == domain 1  score: 34.4 bits;  conditional E-value: 9.4e-13
                         HHHHHTT--TTS-EEETT-TTSHHHHHHHHHHTT--TTTT----SSHHHHHHHHHHHH--EEEEES-HHHHHHHHHHHHHTT-GGG.EEEE CS
             UPF0020  19 alvrlagwkpgepllDPmCGsGtilIEaallganiapgllrefvlelkaeaeeearaelklygsDldrrvvqgareNaekagvgdl.iefs 108
                          +v+l + kp++++ DP CG+ ++l+ a    ++ +      + +++ +e+ +++  e  ++g D+d+ +++ +  N    gv++  ie +
  REBASE::M.Aba0088I 172 MIVELMQPKPTDTICDPACGTAGFLVAASEYLSQHYS-----TEIFANSEVAKRF-SEETFFGYDFDSTMLRIGSMNMMLHGVENPsIENR 256
                         589999********************99988888883.....3445555555544.45569**********************98626666 PP

                         E--GGG--STTS---EEEE----------HHHHHH CS
             UPF0020 109 qadaakLrlkegevdvivtnpPYGerlgskkalek 143
                         +    +  + e+++ +i++npP+  +l+ +   ++
  REBASE::M.Aba0088I 257 DSLSEAHSHIESKYSLILANPPFAGSLDYESCAKN 291
                         6444444467889**********999987654433 PP



Or compare REBASE::M.Aba0088I to CDD or PaperBLAST