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Align REBASE::M.Aba6200I to PF01170 (UPF0020)

REBASE::M.Aba6200I has 552 amino acids

Query:       UPF0020  [M=197]
Accession:   PF01170.18
Description: Putative RNA methylase family UPF0020
Scores for complete sequences (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Sequence           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------           -----------
    2.2e-17   49.5   0.0    3.6e-17   48.8   0.0    1.2  1  REBASE::M.Aba6200I  


Domain annotation for each sequence (and alignments):
>> REBASE::M.Aba6200I  
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   48.8   0.0   3.6e-17   3.6e-17      20     165 ..     201     365 ..     196     392 .. 0.82

  Alignments for each domain:
  == domain 1  score: 48.8 bits;  conditional E-value: 3.6e-17
                         HHHHTT--TTS-EEETT-TTSHHHHHHHHHHTT--TTTT----SS..........HHHHHHHHHHHH--..EEEEES-HHHHHHHHHHHHH CS
             UPF0020  20 lvrlagwkpgepllDPmCGsGtilIEaallganiapgllrefvle..........lkaeaeeearaelk..lygsDldrrvvqgareNaek 98 
                         + +l + + g++++DP CG+G++l+   +   +  +++ r++ l           + a + e+a+a l+  lyg D+d+ +v+ +  N+  
  REBASE::M.Aba6200I 201 MTELVQPQLGHKIADPACGTGGFLLGTYQYIVTQLAIKARTNNLApdedgfvrtsVTAALTEKAQAILQesLYGYDIDATMVRLGLMNLMM 291
                         777888999******************9999999999999999999*****88776666666777666678******************** PP

                         TT-GG.GEEEEE--GGG--STTS---EEEE----------HHHHHHHHHH.......HHHHHHHH-TT..-EEEE CS
             UPF0020  99 agvgd.liefsqadaakLrlkegevdvivtnpPYGerlgskkalekLYse.......flrelkrvlrgggrlvll 165
                          g+++ +i++++   +  + +e+e+d++++npP+  ++++   +e+L  +       f + + r l++gg ++++
  REBASE::M.Aba6200I 292 HGIDEpRIDYQDTLSKGYN-EEAEYDIVLANPPFTGSIDKGDINENLQLSttktellFVENIYRLLKKGGTACVI 365
                         ***87469****9999999.888*****************99999986441111222444555555665665555 PP



Or compare REBASE::M.Aba6200I to CDD or PaperBLAST