REBASE::M.Asp31YI has 508 amino acids
Query: UPF0020 [M=197]
Accession: PF01170.22
Description: Putative RNA methylase family UPF0020
Scores for complete sequences (score includes all domains):
--- full sequence --- --- best 1 domain --- -#dom-
E-value score bias E-value score bias exp N Sequence Description
------- ------ ----- ------- ------ ----- ---- -- -------- -----------
7.5e-13 34.7 0.0 1.3e-12 33.9 0.0 1.4 1 REBASE::M.Asp31YI
Domain annotation for each sequence (and alignments):
>> REBASE::M.Asp31YI
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ! 33.9 0.0 1.3e-12 1.3e-12 20 147 .. 193 314 .. 188 369 .. 0.81
Alignments for each domain:
== domain 1 score: 33.9 bits; conditional E-value: 1.3e-12
UPF0020 20 lvrlagwkdgepllDPmCGsGtilIEaallganiapgllrefvyelkaeaeeear.aelklygsDldrrvvqgareNaekagvgdliefsqa 110
+v ++ ++ e + DP G+ ++l+ a+ ++ +l+++ e+++ ++ ++ g+D+d+ +++ + N gv++ +
REBASE::M.Asp31YI 193 MVAMTAPQPLEAICDPAAGTCGFLVQAGEYLRTNNS--------NLLTNDETSKFfHHEQFHGFDFDSTMLRIGSMNMLLHGVENPDVSYRD 276
999*************************88877773........3333333333348889************************99777777 PP
UPF0020 111 daakLr.lkegevdvivtnpPYGerlgskkalekLYse 147
a+L+ +e++++vi++npP+ +l+ ++ ++L +
REBASE::M.Asp31YI 277 SLADLHsIEEEKYNVILANPPFAGSLDYENVSKELLNV 314
9999**877779**************999888877654 PP
Or compare REBASE::M.Asp31YI to CDD or PaperBLAST