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Align REBASE::M.AspDUT2I to PF01170 (UPF0020)

REBASE::M.AspDUT2I has 520 amino acids

Query:       UPF0020  [M=197]
Accession:   PF01170.18
Description: Putative RNA methylase family UPF0020
Scores for complete sequences (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Sequence           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------           -----------
    3.7e-10   25.9   0.0    8.5e-10   24.8   0.0    1.6  1  REBASE::M.AspDUT2I  


Domain annotation for each sequence (and alignments):
>> REBASE::M.AspDUT2I  
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   24.8   0.0   8.5e-10   8.5e-10      18     177 ..     166     331 ..     162     346 .. 0.78

  Alignments for each domain:
  == domain 1  score: 24.8 bits;  conditional E-value: 8.5e-10
                         HHHHHHTT--TTS-EEETT-TTSHHHHHHHHHHTT--TTTT----SSHHHHHHHHHHHH--EEEEES-HHHHHHHHHHHHHTT-GGGEEEE CS
             UPF0020  18 aalvrlagwkpgepllDPmCGsGtilIEaallganiapgllrefvlelkaeaeeearaelklygsDldrrvvqgareNaekagvgdliefs 108
                          ++vr  + ++ge+++DP  G+ ++lI a +  ++    l+       ++  +++++++  ++g++l ++  + a  N    g+++  e +
  REBASE::M.AspDUT2I 166 NSMVRCLKPQAGETIQDPAAGTAGFLIAADQYIKEQTDDLY------DLTSDQQKFQKNKAFVGVELVPSTRRLALMNCLLHGMEGDDEGV 250
                         589************************99888887774444......34445556667777*****************9999998766655 PP

                         E--GGG--...STTS---EEEE----------HHHH..HHH.HH......HHHHHHHHH-TT..-EEEEEESSHHHHHCC- CS
             UPF0020 109 qadaakLr...lkegevdvivtnpPYGerlgskkal..ekL.Ys......eflrelkrvlrgggrlvlltsenkalekale 177
                              +L    ++  +vdvi++npP+G + g + ++  ++L Y+      +fl+ + r l+ ggr+++++++n  +e+ ++
  REBASE::M.AspDUT2I 251 IHLGNSLGqigANLPKVDVILANPPFGTSKGGEASItrDDLtYPtsnkqlAFLQHIYRGLKPGGRAAVVLPDNVLFESGAG 331
                         5555555544344449*************9999988666773434444446899999999999999999999999988665 PP



Or compare REBASE::M.AspDUT2I to CDD or PaperBLAST