REBASE::M.AspDUT2I has 520 amino acids
Query: UPF0020 [M=197]
Accession: PF01170.22
Description: Putative RNA methylase family UPF0020
Scores for complete sequences (score includes all domains):
--- full sequence --- --- best 1 domain --- -#dom-
E-value score bias E-value score bias exp N Sequence Description
------- ------ ----- ------- ------ ----- ---- -- -------- -----------
2.6e-10 26.4 0.0 5.8e-10 25.3 0.0 1.6 1 REBASE::M.AspDUT2I
Domain annotation for each sequence (and alignments):
>> REBASE::M.AspDUT2I
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ! 25.3 0.0 5.8e-10 5.8e-10 18 177 .. 166 331 .. 162 346 .. 0.78
Alignments for each domain:
== domain 1 score: 25.3 bits; conditional E-value: 5.8e-10
UPF0020 18 aalvrlagwkdgepllDPmCGsGtilIEaallganiapgllrefvyelkaeaeeearaelklygsDldrrvvqgareNaekagvgdliefs 108
++vr + ++ge+++DP G+ ++lI a + ++ l+ ++ +++++++ ++g++l ++ + a N g+++ e +
REBASE::M.AspDUT2I 166 NSMVRCLKPQAGETIQDPAAGTAGFLIAADQYIKEQTDDLY------DLTSDQQKFQKNKAFVGVELVPSTRRLALMNCLLHGMEGDDEGV 250
589************************99888777774443......34445556667777*****************9999998766655 PP
UPF0020 109 qadaakLr...lkegevdvivtnpPYGerlgskkal..ekL.Ys......eflrelkrvlrgggrlvlltaenkalekale 177
+L ++ +vdvi++npP+G + g + ++ ++L Y+ +fl+ + r l+ ggr+++++++n +e+ ++
REBASE::M.AspDUT2I 251 IHLGNSLGqigANLPKVDVILANPPFGTSKGGEASItrDDLtYPtsnkqlAFLQHIYRGLKPGGRAAVVLPDNVLFESGAG 331
5555555544344449*************9999988666773434444446899999999999999999999999998665 PP
Or compare REBASE::M.AspDUT2I to CDD or PaperBLAST