REBASE::M.AspRAC01I has 520 amino acids
Query: UPF0020 [M=197] Accession: PF01170.22 Description: Putative RNA methylase family UPF0020 Scores for complete sequences (score includes all domains): --- full sequence --- --- best 1 domain --- -#dom- E-value score bias E-value score bias exp N Sequence Description ------- ------ ----- ------- ------ ----- ---- -- -------- ----------- 3.3e-13 35.9 0.0 5.9e-13 35.1 0.0 1.3 1 REBASE::M.AspRAC01I Domain annotation for each sequence (and alignments): >> REBASE::M.AspRAC01I # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 35.1 0.0 5.9e-13 5.9e-13 20 171 .. 182 336 .. 177 360 .. 0.78 Alignments for each domain: == domain 1 score: 35.1 bits; conditional E-value: 5.9e-13 UPF0020 20 lvrlagwkdgepllDPmCGsGtilIEaallganiapgllrefvyelkaeaeeearaelklygsDldrrvvqgareNaekagvgdl.iefs 108 +v l+ ++++++ DP +G+ ++l+ a+ ++ +p +l + a+++ ++ + g D+d+ +++ + N gv++ ie++ REBASE::M.AspRAC01I 182 MVALTAPTPQDTICDPASGTCGFLVAAGEYLRRTYPDML-------RVPAQNAHFHHGMFHGYDFDNTMLRIGSMNMVLHGVEHPaIEYR 264 99*********************************9888.......3444445557777************************9549999 PP UPF0020 109 qadaakLrlkegevdvivtnpPYGerlgskkalekLYs.........eflrelkrvlrgggrlvlltaenka 171 + + + + + +i++npP+ +l+++ + ++L s fl + r l++ggr+++++++ REBASE::M.AspRAC01I 265 DSLSQGAAGDADAYSLILANPPFAGSLDHESTAKDLQSivktkktelLFLALFLRLLKTGGRAAVIVPDGVL 336 9999999877779****************9999999762222222222455555666666666666665555 PP
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