REBASE::M.BceM3I has 476 amino acids
Query: UPF0020 [M=197]
Accession: PF01170.22
Description: Putative RNA methylase family UPF0020
Scores for complete sequences (score includes all domains):
--- full sequence --- --- best 1 domain --- -#dom-
E-value score bias E-value score bias exp N Sequence Description
------- ------ ----- ------- ------ ----- ---- -- -------- -----------
1.7e-11 30.3 0.0 3.4e-11 29.3 0.0 1.5 1 REBASE::M.BceM3I
Domain annotation for each sequence (and alignments):
>> REBASE::M.BceM3I
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ! 29.3 0.0 3.4e-11 3.4e-11 19 148 .. 153 276 .. 149 318 .. 0.88
Alignments for each domain:
== domain 1 score: 29.3 bits; conditional E-value: 3.4e-11
UPF0020 19 alvrlagwkdgepllDPmCGsGtilIEaallganiapgllrefvyelkaeaeeearaelklygsDldrrvvqgareNaekagvgdliefsqad 111
++v+l + k+ge+ DP G+ ++ I a + +n y+ ++ +e++++ + g++l ++ + a Na ++++ e+ +
REBASE::M.BceM3I 153 VMVQLVDPKPGERCNDPAAGTFGFMIAADQYLKNKT------DDYFDLDPQDAEFQKKEAFTGMELVKETHRLALMNALLHDMEGRLEQGDTL 239
7*************************9988888888......567889999999999999*******************************99 PP
UPF0020 112 aakLrlkegevdvivtnpPYGerlgskkal.ekLYsef 148
+ + ++ ++dvi+tnpP+G + g ++a ++L+ e+
REBASE::M.BceM3I 240 SSNGKWMK-NFDVILTNPPFGTKKGGERATrDDLTFET 276
99988555.7************9999998867776555 PP
Or compare REBASE::M.BceM3I to CDD or PaperBLAST