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Align REBASE::M.BceSVI to PF01170 (UPF0020)

REBASE::M.BceSVI has 484 amino acids

Query:       UPF0020  [M=197]
Accession:   PF01170.18
Description: Putative RNA methylase family UPF0020
Scores for complete sequences (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Sequence         Description
    ------- ------ -----    ------- ------ -----   ---- --  --------         -----------
    1.3e-10   27.4   0.0    2.8e-10   26.3   0.0    1.5  1  REBASE::M.BceSVI  


Domain annotation for each sequence (and alignments):
>> REBASE::M.BceSVI  
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   26.3   0.0   2.8e-10   2.8e-10      19     148 ..     162     285 ..     158     329 .. 0.86

  Alignments for each domain:
  == domain 1  score: 26.3 bits;  conditional E-value: 2.8e-10
                       HHHHHTT--TTS-EEETT-TTSHHHHHHHHHHTT--TTTT----SSHHHHHHHHHHHH--EEEEES-HHHHHHHHHHHHHTT-GGGEEEEE-- CS
           UPF0020  19 alvrlagwkpgepllDPmCGsGtilIEaallganiapgllrefvlelkaeaeeearaelklygsDldrrvvqgareNaekagvgdliefsqad 111
                       ++v+l + k ge+  DP  G+ ++ I a +  +n          ++  +  ++e++++  + g++l +   + a  Na   g++++ e  +  
  REBASE::M.BceSVI 162 VMVKLVDPKVGEKCSDPAAGTFGFMIAADQYLKNQT------DDYFDIDPEQAEFQKTEAFTGMELVKDTHRLALMNALLHGIEGRLEHGDTL 248
                       7*************************9998888888......455666777777888888*******************************99 PP

                       GGG--STTS---EEEE----------HHHH.HHHHHHH CS
           UPF0020 112 aakLrlkegevdvivtnpPYGerlgskkal.ekLYsef 148
                         + +  + + dvi+tnpP+G + g ++a  ++L+ e+
  REBASE::M.BceSVI 249 SSNGKWLT-SLDVILTNPPFGTKKGGERATrDDLTFET 285
                       99888666.8************9999998867776554 PP



Or compare REBASE::M.BceSVI to CDD or PaperBLAST