REBASE::M.BceSVI has 484 amino acids
Query: UPF0020 [M=197]
Accession: PF01170.22
Description: Putative RNA methylase family UPF0020
Scores for complete sequences (score includes all domains):
--- full sequence --- --- best 1 domain --- -#dom-
E-value score bias E-value score bias exp N Sequence Description
------- ------ ----- ------- ------ ----- ---- -- -------- -----------
9.4e-11 27.9 0.0 2e-10 26.8 0.0 1.5 1 REBASE::M.BceSVI
Domain annotation for each sequence (and alignments):
>> REBASE::M.BceSVI
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ! 26.8 0.0 2e-10 2e-10 19 148 .. 162 285 .. 158 330 .. 0.86
Alignments for each domain:
== domain 1 score: 26.8 bits; conditional E-value: 2e-10
UPF0020 19 alvrlagwkdgepllDPmCGsGtilIEaallganiapgllrefvyelkaeaeeearaelklygsDldrrvvqgareNaekagvgdliefsqad 111
++v+l + k ge+ DP G+ ++ I a + +n y+ + ++e++++ + g++l + + a Na g++++ e +
REBASE::M.BceSVI 162 VMVKLVDPKVGEKCSDPAAGTFGFMIAADQYLKNQT------DDYFDIDPEQAEFQKTEAFTGMELVKDTHRLALMNALLHGIEGRLEHGDTL 248
7*************************9998888888......456667777788888889*******************************99 PP
UPF0020 112 aakLrlkegevdvivtnpPYGerlgskkal.ekLYsef 148
+ + + + dvi+tnpP+G + g ++a ++L+ e+
REBASE::M.BceSVI 249 SSNGKWLT-SLDVILTNPPFGTKKGGERATrDDLTFET 285
99888666.8************9999998867776655 PP
Or compare REBASE::M.BceSVI to CDD or PaperBLAST