REBASE::M.Bli37I has 509 amino acids
Query: UPF0020 [M=197]
Accession: PF01170.22
Description: Putative RNA methylase family UPF0020
Scores for complete sequences (score includes all domains):
--- full sequence --- --- best 1 domain --- -#dom-
E-value score bias E-value score bias exp N Sequence Description
------- ------ ----- ------- ------ ----- ---- -- -------- -----------
1.3e-10 27.4 0.0 1.9e-09 23.6 0.0 2.4 1 REBASE::M.Bli37I
Domain annotation for each sequence (and alignments):
>> REBASE::M.Bli37I
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ! 23.6 0.0 1.9e-09 1.9e-09 16 131 .. 189 286 .. 182 289 .. 0.85
Alignments for each domain:
== domain 1 score: 23.6 bits; conditional E-value: 1.9e-09
UPF0020 16 LAaalvrlagwkdgepllDPmCGsGtilIEaallganiapgllrefvyelkaeaeeearaelklygsDldrrvvqgareNaekagvgd.lief 107
++ +l rl + +++++++DP CGsG++l+ a ++ + + +yg + + + a N g++d +ie+
REBASE::M.Bli37I 189 VSEVLARLVKPQENDRIYDPTCGSGSLLLKVAKQVPSKK----------------------VAIYGQERNGATHSLALMNMYLHGIDDaKIEW 259
566788999*******************99888777666......................569**********************87479** PP
UPF0020 108 sqadaakLrlkeg...evdvivtnpPY 131
+ a L+l++g ++ viv+npP+
REBASE::M.Bli37I 260 GDTLANPLHLEDGklmKFQVIVANPPF 286
*********444434589********9 PP
Or compare REBASE::M.Bli37I to CDD or PaperBLAST