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Align REBASE::M.BspD4I to PF01170 (UPF0020)

REBASE::M.BspD4I has 748 amino acids

Query:       UPF0020  [M=197]
Accession:   PF01170.18
Description: Putative RNA methylase family UPF0020
Scores for complete sequences (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Sequence         Description
    ------- ------ -----    ------- ------ -----   ---- --  --------         -----------
    7.6e-16   44.5   0.0      3e-15   42.5   0.0    2.0  1  REBASE::M.BspD4I  


Domain annotation for each sequence (and alignments):
>> REBASE::M.BspD4I  
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   42.5   0.0     3e-15     3e-15      19     138 ..     317     475 ..     311     481 .. 0.82

  Alignments for each domain:
  == domain 1  score: 42.5 bits;  conditional E-value: 3e-15
                       HHHHHTT--TTS-EEETT-TTSHHHHHHHHHHTT--TTTT----SS.................................HHHHHHHHHH.... CS
           UPF0020  19 alvrlagwkpgepllDPmCGsGtilIEaallganiapgllrefvle.................................lkaeaeeear.... 74 
                        +v + + ++ge+l DP CGsG++lI a   +++ +   ++e + +                                      e +++    
  REBASE::M.BspD4I 317 FMVDVLDPQEGEVLCDPCCGSGGFLIRAFEYVREKIENEIQEAKEKikkdtftkeyenlledekgiidekvneqfttlnF----ELDINnpns 405
                       699999***********************99999999888888888999*********************9999977552....222223333 PP

                       ..HH--...EEEEES-HHHHHHHHHHHHHTT-GGGEEEEE--GGG--.STTS---EEEE----------H CS
           UPF0020  75 ..aelk...lygsDldrrvvqgareNaekagvgdliefsqadaakLr.lkegevdvivtnpPYGerlgsk 138
                         ++l+   ++g D ++r+ ++a+ N    g g+     +    +++   ++ +d+i+tnpP+G r++++
  REBASE::M.BspD4I 406 rlRRLSfdcIFGTDANPRMSRTAKMNMIMHGDGHGGVHHNDGLLNVNgVFDNRFDIILTNPPFGSRVEKN 475
                       455555779*****************999888776555555666677655669*************9976 PP



Or compare REBASE::M.BspD4I to CDD or PaperBLAST