REBASE::M.BspD4I has 748 amino acids
Query: UPF0020 [M=197]
Accession: PF01170.22
Description: Putative RNA methylase family UPF0020
Scores for complete sequences (score includes all domains):
--- full sequence --- --- best 1 domain --- -#dom-
E-value score bias E-value score bias exp N Sequence Description
------- ------ ----- ------- ------ ----- ---- -- -------- -----------
7.4e-16 44.5 0.1 2.7e-15 42.7 0.1 2.0 1 REBASE::M.BspD4I
Domain annotation for each sequence (and alignments):
>> REBASE::M.BspD4I
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ! 42.7 0.1 2.7e-15 2.7e-15 19 138 .. 317 475 .. 311 485 .. 0.82
Alignments for each domain:
== domain 1 score: 42.7 bits; conditional E-value: 2.7e-15
UPF0020 19 alvrlagwkdgepllDPmCGsGtilIEaallganiapgllrefvye.................................lkaeaeeear.... 74
+v + + ++ge+l DP CGsG++lI a +++ + ++e + + e +++
REBASE::M.BspD4I 317 FMVDVLDPQEGEVLCDPCCGSGGFLIRAFEYVREKIENEIQEAKEKikkdtftkeyenlledekgiidekvneqfttlnF----ELDINnpns 405
699999***********************99999999888888888999*********************9999976552....222223343 PP
UPF0020 75 ..aelk...lygsDldrrvvqgareNaekagvgdliefsqadaakLr.lkegevdvivtnpPYGerlgsk 138
++l+ ++g D ++r+ ++a+ N g g+ + +++ ++ +d+i+tnpP+G r++++
REBASE::M.BspD4I 406 rlRRLSfdcIFGTDANPRMSRTAKMNMIMHGDGHGGVHHNDGLLNVNgVFDNRFDIILTNPPFGSRVEKN 475
455555779*****************998888776555555666677655669*************9976 PP
Or compare REBASE::M.BspD4I to CDD or PaperBLAST