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Align REBASE::M.BspLA1I to PF01170 (UPF0020)

REBASE::M.BspLA1I has 566 amino acids

Query:       UPF0020  [M=197]
Accession:   PF01170.18
Description: Putative RNA methylase family UPF0020
Scores for complete sequences (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Sequence          Description
    ------- ------ -----    ------- ------ -----   ---- --  --------          -----------
    2.5e-16   46.1   0.0    4.3e-16   45.3   0.0    1.3  1  REBASE::M.BspLA1I  


Domain annotation for each sequence (and alignments):
>> REBASE::M.BspLA1I  
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   45.3   0.0   4.3e-16   4.3e-16      20     148 ..     215     355 ..     210     388 .. 0.76

  Alignments for each domain:
  == domain 1  score: 45.3 bits;  conditional E-value: 4.3e-16
                        HHHHTT--TTS-EEETT-TTSHHHHHHHHHHTT--TTTT----SS..........HHHHHHHHHHHH--..EEEEES-HHHHHHHHHHHHHT CS
            UPF0020  20 lvrlagwkpgepllDPmCGsGtilIEaallganiapgllrefvle..........lkaeaeeearaelk..lygsDldrrvvqgareNaeka 99 
                        + +l + + g++++DP CGsG++l+ a +   +  +++  ++ l           + a + e+a+a l   l+g D+d+ +v+ +  N+   
  REBASE::M.BspLA1I 215 MAELVQPQLGHKIADPACGSGGFLLGAYQYIVTQLAIKAGSTNLTpdedgfvrtsVAAALTEKAQAILAssLWGYDIDSTMVRLGLMNLMMH 306
                        677888999*****************9988777775555444444899**977765555555555333357********************* PP

                        T-GG.GEEEEE--GGG--STTS---EEEE----------HHHHHHHHHHH CS
            UPF0020 100 gvgd.liefsqadaakLrlkegevdvivtnpPYGerlgskkalekLYsef 148
                        g+++  i++++   ++   +e+e+d++ +npP+  ++++   +e+L  ++
  REBASE::M.BspLA1I 307 GIDEpHIDYKDTLSKSYI-EEAEYDIVMANPPFTGSIDKGDINENLQLAT 355
                        **9835899998888877.888*****************99999986553 PP



Or compare REBASE::M.BspLA1I to CDD or PaperBLAST