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Align REBASE::M.Bst12778I to PF01170 (UPF0020)

REBASE::M.Bst12778I has 501 amino acids

Query:       UPF0020  [M=197]
Accession:   PF01170.18
Description: Putative RNA methylase family UPF0020
Scores for complete sequences (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Sequence            Description
    ------- ------ -----    ------- ------ -----   ---- --  --------            -----------
    3.2e-16   45.7   0.0    9.3e-16   44.2   0.0    1.8  1  REBASE::M.Bst12778I  


Domain annotation for each sequence (and alignments):
>> REBASE::M.Bst12778I  
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   44.2   0.0   9.3e-16   9.3e-16      15     192 ..     191     366 ..     189     370 .. 0.78

  Alignments for each domain:
  == domain 1  score: 44.2 bits;  conditional E-value: 9.3e-16
                          HHHHHHHHHTT--TTS-EEETT-TTSHHHHHHHHHHTT--TTTT----SSHHHHHHHHHHHH--.EEEEES-HHHHHHHHHHHHHTT-GG CS
              UPF0020  15 tLAaalvrlagwkpgepllDPmCGsGtilIEaallganiapgllrefvlelkaeaeeearaelk.lygsDldrrvvqgareNaekagvgd 103
                          +L +a+v+l + k ge+++DP CG+G++l Ea  + ++ a            ++ e+++  ++k +yg ++ +     +  N+   g++ 
  REBASE::M.Bst12778I 191 SLVRAMVKLLNPKIGETIYDPACGTGGFLAEAHYQMKDQA------------KTPEKRKVLNYKtFYGQEKTPLPFVLCLMNLTLHGMDY 268
                          5889**********************************99............3455566666666*******************999986 PP

                          G.EEEE...E--GGG--STTS---EEEE-------....---HHHH..HHHHHHHHHHHHHH-TT..-EEEEEESSHHHHHCC---ESEE CS
              UPF0020 104 l.iefs...qadaakLrlkegevdvivtnpPYGer....lgskkal..ekLYseflrelkrvlrgggrlvlltsenkalekaleeralrk 183
                            i+     q ++++++ ++++ dvi++npP+G +    ++s+  +  ++    fl+ ++++l+ +gr++++++e   +++ ++ ++l+k
  REBASE::M.Bst12778I 269 PrIAKGntlQRNIRDIE-DHEKRDVILANPPFGGKeqtmIQSNFPIesNATEILFLQHIEKMLKVNGRAAVIIPEGVLFQTNAAYMNLKK 357
                          42444311155666666.8889**********97622213333333213344468999**********************9999999999 PP

                          EEEEETTEE CS
              UPF0020 184 vkeknvklg 192
                          + ++  +l 
  REBASE::M.Bst12778I 358 KLLEECNLH 366
                          877776665 PP



Or compare REBASE::M.Bst12778I to CDD or PaperBLAST