REBASE::M.BstLVI has 579 amino acids
Query: UPF0020 [M=197]
Accession: PF01170.22
Description: Putative RNA methylase family UPF0020
Scores for complete sequences (score includes all domains):
--- full sequence --- --- best 1 domain --- -#dom-
E-value score bias E-value score bias exp N Sequence Description
------- ------ ----- ------- ------ ----- ---- -- -------- -----------
5.1e-10 25.5 0.1 4.5e-09 22.4 0.1 2.5 1 REBASE::M.BstLVI
Domain annotation for each sequence (and alignments):
>> REBASE::M.BstLVI
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ! 22.4 0.1 4.5e-09 4.5e-09 66 170 .. 61 188 .. 18 207 .. 0.67
Alignments for each domain:
== domain 1 score: 22.4 bits; conditional E-value: 4.5e-09
UPF0020 66 kaeaeeearaelklygsDldrrvvqgareNaekagvgdl........iefsqadaakLr..lkegevdvivtnpPYGer..lgskkale.... 142
+++ ++++ +l+l+g+D+d +++ a+e +++ g +++ +s+ d+ +L ++ + vd+i++npPY + lg++ka +
REBASE::M.BstLVI 61 INKVAQSMNIQLELIGVDFDIDAINIANERLSRSGHKNFrlinkdflEMVSEGDNYDLFniEELEPVDIIIANPPYVRTqiLGAEKAQKlrek 153
344555666778899999999999999998888887654111111113456677777766645559**********76433444444322223 PP
UPF0020 143 .......kLYseflrelkrvlrgggrlvlltaenk 170
+LY++fl ++ ++l+++g + ++t+++
REBASE::M.BstLVI 154 fnlkgrvDLYQAFLVAMTQQLKSNGIIGVITSNRY 188
333344469**************998888887654 PP
Or compare REBASE::M.BstLVI to CDD or PaperBLAST