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Align REBASE::M.BstLVI to PF01170 (UPF0020)

REBASE::M.BstLVI has 579 amino acids

Query:       UPF0020  [M=197]
Accession:   PF01170.18
Description: Putative RNA methylase family UPF0020
Scores for complete sequences (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Sequence         Description
    ------- ------ -----    ------- ------ -----   ---- --  --------         -----------
    5.9e-10   25.3   0.1    5.2e-09   22.2   0.1    2.5  1  REBASE::M.BstLVI  


Domain annotation for each sequence (and alignments):
>> REBASE::M.BstLVI  
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   22.2   0.1   5.2e-09   5.2e-09      66     170 ..      61     188 ..      18     207 .. 0.67

  Alignments for each domain:
  == domain 1  score: 22.2 bits;  conditional E-value: 5.2e-09
                       HHHHHHHHHHH--EEEEES-HHHHHHHHHHHHHTT-GGG........EEEEE--GGG--..STTS---EEEE-------..---HHHHH.... CS
           UPF0020  66 kaeaeeearaelklygsDldrrvvqgareNaekagvgdl........iefsqadaakLr..lkegevdvivtnpPYGer..lgskkale.... 142
                        +++ ++++ +l+l+g+D+d  +++ a+e +++ g +++          +s+ d+ +L   ++ + vd+i++npPY +   lg++ka +    
  REBASE::M.BstLVI  61 INKVAQSMNIQLELIGVDFDIDAINIANERLSRSGHKNFrlinkdflEMVSEGDNYDLFniEELEPVDIIIANPPYVRTqiLGAEKAQKlrek 153
                       344555666778899999999999999998888887654111111113456677777766645559**********76433454444322223 PP

                       .......HHHHHHHHHHHHH-TT..-EEEEEESSH CS
           UPF0020 143 .......kLYseflrelkrvlrgggrlvlltsenk 170
                              +LY++fl ++ ++l+++g + ++ts++ 
  REBASE::M.BstLVI 154 fnlkgrvDLYQAFLVAMTQQLKSNGIIGVITSNRY 188
                       333344479**************998888887654 PP



Or compare REBASE::M.BstLVI to CDD or PaperBLAST