REBASE::M.Bsu21228I has 476 amino acids
Query: UPF0020 [M=197] Accession: PF01170.22 Description: Putative RNA methylase family UPF0020 Scores for complete sequences (score includes all domains): --- full sequence --- --- best 1 domain --- -#dom- E-value score bias E-value score bias exp N Sequence Description ------- ------ ----- ------- ------ ----- ---- -- -------- ----------- 1.6e-10 27.1 0.0 3.6e-10 26.0 0.0 1.6 1 REBASE::M.Bsu21228I Domain annotation for each sequence (and alignments): >> REBASE::M.Bsu21228I # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 26.0 0.0 3.6e-10 3.6e-10 19 145 .. 153 273 .. 149 326 .. 0.82 Alignments for each domain: == domain 1 score: 26.0 bits; conditional E-value: 3.6e-10 UPF0020 19 alvrlagwkdgepllDPmCGsGtilIEaallganiapgllrefvyelkaeaeeearaelklygsDldrrvvqgareNaekagvgdliefs 108 ++v+l + k ge+ +DP G+ ++ I a + +n y+ + e+e++++ ++g++l + + a Na +++++ e+ REBASE::M.Bsu21228I 153 VMVQLIDPKIGERCADPAAGTFGFMIAADQYLKNQT------DDYFDIEPQEAEFQKKEAFVGMELVKDTHRLALMNALLHNIEGRLEQG 236 79************************9998888888......455666667777778888*****************************9 PP UPF0020 109 qadaakLrlkegevdvivtnpPYGerlgskkal.ekLY 145 + + + ++ ++dvi+tnpP+G + g ++ ++L+ REBASE::M.Bsu21228I 237 DTLSGNGKWMK-NFDVILTNPPFGTKKGGERVSrDDLT 273 99988888555.7***********98776665435665 PP
Or compare REBASE::M.Bsu21228I to CDD or PaperBLAST