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Align REBASE::M.Cau700975I to PF01170 (UPF0020)

REBASE::M.Cau700975I has 590 amino acids

Query:       UPF0020  [M=197]
Accession:   PF01170.18
Description: Putative RNA methylase family UPF0020
Scores for complete sequences (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Sequence             Description
    ------- ------ -----    ------- ------ -----   ---- --  --------             -----------
    5.5e-14   38.4   0.0    1.2e-13   37.3   0.0    1.5  1  REBASE::M.Cau700975I  


Domain annotation for each sequence (and alignments):
>> REBASE::M.Cau700975I  
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   37.3   0.0   1.2e-13   1.2e-13      20     177 ..     236     396 ..     227     414 .. 0.68

  Alignments for each domain:
  == domain 1  score: 37.3 bits;  conditional E-value: 1.2e-13
                           HHHHTT--TTS-EEETT-TTSHHHHHHHHHHTT--TTTT----SSHHHHHHHHHHHH--...EEEEES-HHHHHHHHHHHHHTT-GGGE CS
               UPF0020  20 lvrlagwkpgepllDPmCGsGtilIEaallganiapgllrefvlelkaeaeeearaelk...lygsDldrrvvqgareNaekagvgdli 105
                           lv l + +p+++++DP CG+ ++l+ a    a+      r   +      ++++r++     l g+D+d+ +v+ a  N    g ++  
  REBASE::M.Cau700975I 236 LVALMEPTPQQRIIDPACGTAGFLVAANDWIAHHH----RADLF------NKDTRTTFTnegLTGFDFDKTMVRIAAMNMFMHGFEEPN 314
                           89999********************7764333333....22222......3334422222359**********************9986 PP

                           EEEE--GGG--.STTS---EEEE----------HHHHHHHHHH.........HHHHHHHH-TT..-EEEEEESSHHHHHCC- CS
               UPF0020 106 efsqadaakLr.lkegevdvivtnpPYGerlgskkalekLYse.........flrelkrvlrgggrlvlltsenkalekale 177
                             +    ++L+   ++ +d++++npP+  +l++     kL s          f +++ + l+ ggr++++++e   + +  +
  REBASE::M.Cau700975I 315 ISYRDSLQQLPtTFDEAFDLVLANPPFAGSLDKDAVDPKLKSVttakkteilFVHRFLQLLKPGGRAAVIVPEGVLFGSTKA 396
                           666669999**544558***********999887655555443111122222445555566666666666666655555555 PP



Or compare REBASE::M.Cau700975I to CDD or PaperBLAST