REBASE::M.Cco14983I has 495 amino acids
Query: UPF0020 [M=197] Accession: PF01170.22 Description: Putative RNA methylase family UPF0020 Scores for complete sequences (score includes all domains): --- full sequence --- --- best 1 domain --- -#dom- E-value score bias E-value score bias exp N Sequence Description ------- ------ ----- ------- ------ ----- ---- -- -------- ----------- 1e-12 34.3 0.0 2.6e-12 33.0 0.0 1.6 1 REBASE::M.Cco14983I Domain annotation for each sequence (and alignments): >> REBASE::M.Cco14983I # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 33.0 0.0 2.6e-12 2.6e-12 17 193 .. 183 365 .. 180 368 .. 0.69 Alignments for each domain: == domain 1 score: 33.0 bits; conditional E-value: 2.6e-12 UPF0020 17 AaalvrlagwkdgepllDPmCGsGtilIEaallganiapgllrefvyelkaeaeeear.aelklygsDldrrvvqgareN..aekagvgd 103 +a+v++ + k+ e+++DP CGs ++l+E l + r++ ++ +ee + ++ l+g ++ + + + N +++ + + REBASE::M.Cco14983I 183 IRAMVEVIDPKAKERIYDPACGSCGFLVESFLHILYED----RNKNKKANLSVEELEFlQNDALFGKEKTPLSYAMGVMNmiLHEVKSPN 268 58****************************99888777....444444444555544435556999999999999999983345555567 PP UPF0020 104 liefsqa..daakLrlkegevdvivtnpPYGerlgskkal......ekLYseflrelkrvlrgggrlvlltaenkalekaleeralrkvk 185 +i+ +++ ++++++ ++++++vi++npP+G + +++ ++ ++ fl+ + + l+++gr +++++e +++ + +++k REBASE::M.Cco14983I 269 IIKTNTLnkKITDIT-QSEKYEVILANPPFGGKEKEQIQNnfpvksNATELLFLQHILKSLNNNGRCAIIVPEGVLFQNSNAFVSVKKDL 357 777776411567777.7779***********77665543311111122233477777888888888888888887777766666666666 PP UPF0020 186 eknvklgl 193 ++n +l++ REBASE::M.Cco14983I 358 LENFNLEC 365 66666666 PP
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