REBASE::M.Ces8809I has 584 amino acids
Query: UPF0020 [M=197]
Accession: PF01170.22
Description: Putative RNA methylase family UPF0020
Scores for complete sequences (score includes all domains):
--- full sequence --- --- best 1 domain --- -#dom-
E-value score bias E-value score bias exp N Sequence Description
------- ------ ----- ------- ------ ----- ---- -- -------- -----------
2.3e-10 26.6 0.0 4e-10 25.8 0.0 1.3 1 REBASE::M.Ces8809I
Domain annotation for each sequence (and alignments):
>> REBASE::M.Ces8809I
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ! 25.8 0.0 4e-10 4e-10 31 132 .. 88 193 .. 84 227 .. 0.79
Alignments for each domain:
== domain 1 score: 25.8 bits; conditional E-value: 4e-10
UPF0020 31 pllDPmCGsGtilIEaallganiapgllrefvye......lkaeaeeear..aelklygsDldrrvvqgareNaekagvgdliefsqadaa 113
+++DP CG+G ilI +n + +++ ++ lk ++++ +++l+g+D+d +++ + g ++e +
REBASE::M.Ces8809I 88 KIVDPSCGTGNILICCFKFLQNLY----KDNLSFineangLKLNVKNIDDhiIRYNLFGFDIDDIALKILVIDLYDLSKGIIVENIFNKDF 174
69************9888888888....5555555568887777766665457888***************99999999988886655545 PP
UPF0020 114 kLrlkegevdvivtnpPYG 132
L ++e ++d++++npPY
REBASE::M.Ces8809I 175 LLYENECKYDIVIGNPPYV 193
4667888***********4 PP
Or compare REBASE::M.Ces8809I to CDD or PaperBLAST