REBASE::M.CfrMH16II has 469 amino acids
Query: UPF0020 [M=197] Accession: PF01170.22 Description: Putative RNA methylase family UPF0020 Scores for complete sequences (score includes all domains): --- full sequence --- --- best 1 domain --- -#dom- E-value score bias E-value score bias exp N Sequence Description ------- ------ ----- ------- ------ ----- ---- -- -------- ----------- 3.9e-11 29.1 0.0 9.1e-11 27.9 0.0 1.6 1 REBASE::M.CfrMH16II Domain annotation for each sequence (and alignments): >> REBASE::M.CfrMH16II # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 27.9 0.0 9.1e-11 9.1e-11 17 142 .. 152 263 .. 149 321 .. 0.80 Alignments for each domain: == domain 1 score: 27.9 bits; conditional E-value: 9.1e-11 UPF0020 17 AaalvrlagwkdgepllDPmCGsGtilIEaallganiapgllrefvyelkaeaeeearaelklygsDldrrvvqgareNaekagvgdlie 106 a+v+l++ ge ++DP GsG++l+ a ++ ++e + + k g+++ ++ + + N g++ +i REBASE::M.CfrMH16II 152 VEAIVKLTKPALGELIQDPATGSGGFLVAANDYILRAN-------------SIKEYKSNPPKYQGVEIEKNTRRICLMNTFLHGLDAEII 228 579*************************7765444444.............4555666777799************************** PP UPF0020 107 fsqadaakLrlkegevdvivtnpPYGerlgskkale 142 + +a + + + + ++i++npP+G + gsk+ l+ REBASE::M.CfrMH16II 229 YGDALTDDAE-SLEPANIILANPPFGSKAGSKRPLR 263 ***9999999.444899***************9774 PP
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