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Align REBASE::M.Cis15098I to PF01170 (UPF0020)

REBASE::M.Cis15098I has 495 amino acids

Query:       UPF0020  [M=197]
Accession:   PF01170.18
Description: Putative RNA methylase family UPF0020
Scores for complete sequences (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Sequence            Description
    ------- ------ -----    ------- ------ -----   ---- --  --------            -----------
    2.1e-13   36.5   0.1      5e-12   32.0   0.0    2.7  2  REBASE::M.Cis15098I  


Domain annotation for each sequence (and alignments):
>> REBASE::M.Cis15098I  
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.5   0.0      0.19      0.19      64     116 ..      99     152 ..      83     162 .. 0.66
   2 !   32.0   0.0     5e-12     5e-12      20     132 ..     194     288 ..     188     316 .. 0.82

  Alignments for each domain:
  == domain 1  score: -2.5 bits;  conditional E-value: 0.19
                          SHHHHHHHHHHHH--..EEEEES-HHHHHHHHHHHHHTT-GGGEEEEE--GGG-- CS
              UPF0020  64 elkaeaeeearaelk..lygsDldrrvvqgareNaekagvgdliefsqadaakLr 116
                          +++ ++e +++++l+  ++ +D++++  + +r++ ++a +++lie  + d  +Lr
  REBASE::M.Cis15098I  99 KILMKIEDDNKEKLEgiFRNIDFNSES-ELGRTKERNAALKNLIEDFADDSLDLR 152
                          466677777776666667777777765.677888888888888877666777776 PP

  == domain 2  score: 32.0 bits;  conditional E-value: 5e-12
                          HHHHTT--TTS-EEETT-TTSHHHHHHHHHHTT--TTTT----SSHHHHHHHHHHHH--EEEEES-HHHHHHHHHHHHHTT-GG.GEEEE CS
              UPF0020  20 lvrlagwkpgepllDPmCGsGtilIEaallganiapgllrefvlelkaeaeeearaelklygsDldrrvvqgareNaekagvgd.liefs 108
                          l +l g+k+g++++DP CGsG++lI aa  + +                         +lyg + + +  + a+ N    ++ d  ie+ 
  REBASE::M.Cis15098I 194 LAMLVGAKDGDRIYDPTCGSGSLLIKAAKEVGTQN----------------------FRLYGQERNGQTHALAKMNMFLHEIHDaVIEWG 261
                          77999***********************9887776......................469*****************99999873589** PP

                          E--GGG--STTS...---EEEE----- CS
              UPF0020 109 qadaakLrlkeg...evdvivtnpPYG 132
                          +     L+l+++   ++d iv+npP+ 
  REBASE::M.Cis15098I 262 DTLRNPLHLENDrlmKFDKIVSNPPFS 288
                          *******944433569*********95 PP



Or compare REBASE::M.Cis15098I to CDD or PaperBLAST