REBASE::M.Cje266II has 494 amino acids
Query: UPF0020 [M=197]
Accession: PF01170.22
Description: Putative RNA methylase family UPF0020
Scores for complete sequences (score includes all domains):
--- full sequence --- --- best 1 domain --- -#dom-
E-value score bias E-value score bias exp N Sequence Description
------- ------ ----- ------- ------ ----- ---- -- -------- -----------
4e-12 32.3 0.0 1.3e-11 30.7 0.0 1.8 1 REBASE::M.Cje266II
Domain annotation for each sequence (and alignments):
>> REBASE::M.Cje266II
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ! 30.7 0.0 1.3e-11 1.3e-11 18 169 .. 183 340 .. 179 366 .. 0.67
Alignments for each domain:
== domain 1 score: 30.7 bits; conditional E-value: 1.3e-11
UPF0020 18 aalvrlagwkdgepllDPmCGsGtilIEaallganiapgllrefvyelkaeaeeear.aelklygsDldrrvvqgareNa..ekagvgdli 105
a+v++ + k+ e+++DP CGs ++l+E l + r++ ++ +ee + ++ l+g ++ + + + N ++ ++i
REBASE::M.Cje266II 183 KAMVEVIDPKPKERIYDPSCGSCGFLVESFLHILYKD----RTKGKKANLSVEELEFlKNDALFGKEKTPLSYAMGVMNMilHEISSPNII 269
79**************************988776666....44444444455554444555599999999888888888611444445666 PP
UPF0020 106 efsq..adaakLrlkegevdvivtnpPYGerlgsk.kal.....ekLYseflrelkrvlrgggrlvlltaen 169
+ ++ +++++++ ++++++vi++npP+G + +++ +++ ++ fl+ + r l+++gr +++++e
REBASE::M.Cje266II 270 KTNTlsKKITDIT-EQEKYEVILANPPFGGKEKEQiQENfpiksNATELLFLQHILRSLKNNGRCAIIVPEG 340
6654115788888.6669**********97644431222110111222236666666666666666666665 PP
Or compare REBASE::M.Cje266II to CDD or PaperBLAST