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Align REBASE::M.Cje266II to PF01170 (UPF0020)

REBASE::M.Cje266II has 494 amino acids

Query:       UPF0020  [M=197]
Accession:   PF01170.18
Description: Putative RNA methylase family UPF0020
Scores for complete sequences (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Sequence           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------           -----------
    4.8e-12   32.1   0.0    1.6e-11   30.4   0.0    1.9  1  REBASE::M.Cje266II  


Domain annotation for each sequence (and alignments):
>> REBASE::M.Cje266II  
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   30.4   0.0   1.6e-11   1.6e-11      18     168 ..     183     339 ..     179     366 .. 0.67

  Alignments for each domain:
  == domain 1  score: 30.4 bits;  conditional E-value: 1.6e-11
                         HHHHHHTT--TTS-EEETT-TTSHHHHHHHHHHTT--TTTT----SSHHHHHHHHHH.HH--EEEEES-HHHHHHHHHHH..HHTT-GGGE CS
             UPF0020  18 aalvrlagwkpgepllDPmCGsGtilIEaallganiapgllrefvlelkaeaeeear.aelklygsDldrrvvqgareNa..ekagvgdli 105
                          a+v++ + kp e+++DP CGs ++l+E  l   +      r++  ++   +ee +  ++  l+g ++ +   + +  N   ++    ++i
  REBASE::M.Cje266II 183 KAMVEVIDPKPKERIYDPSCGSCGFLVESFLHILYKD----RTKGKKANLSVEELEFlKNDALFGKEKTPLSYAMGVMNMilHEISSPNII 269
                         79**************************988776666....44444444455554444555599999999888888888611444445666 PP

                         EEEE..--GGG--STTS---EEEE----------H.HHH.....HHHHHHHHHHHHHH-TT..-EEEEEES CS
             UPF0020 106 efsq..adaakLrlkegevdvivtnpPYGerlgsk.kal.....ekLYseflrelkrvlrgggrlvlltse 168
                         + ++  +++++++ ++++++vi++npP+G + +++ +++     ++    fl+ + r l+++gr +++++e
  REBASE::M.Cje266II 270 KTNTlsKKITDIT-EQEKYEVILANPPFGGKEKEQiQENfpiksNATELLFLQHILRSLKNNGRCAIIVPE 339
                         6654115788888.6669**********9754443122111011122223566666666666666666665 PP



Or compare REBASE::M.Cje266II to CDD or PaperBLAST