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Align REBASE::M.CsiBAA15III to PF01170 (UPF0020)

REBASE::M.CsiBAA15III has 523 amino acids

Query:       UPF0020  [M=197]
Accession:   PF01170.22
Description: Putative RNA methylase family UPF0020
Scores for complete sequences (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Sequence              Description
    ------- ------ -----    ------- ------ -----   ---- --  --------              -----------
    5.4e-15   41.7   0.0    1.2e-14   40.6   0.0    1.5  1  REBASE::M.CsiBAA15III  


Domain annotation for each sequence (and alignments):
>> REBASE::M.CsiBAA15III  
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   40.6   0.0   1.2e-14   1.2e-14      20     146 ..     170     289 ..     163     347 .. 0.72

  Alignments for each domain:
  == domain 1  score: 40.6 bits;  conditional E-value: 1.2e-14
                UPF0020  20 lvrlagwkdgepllDPmCGsGtilIEaallganiapgllrefvyelkaeaeeear.aelklygsDldrrvvqgareNaekagvgdlie 106
                            lv l + ++ ++++DP CG+ ++l+ a   +a+      r+  y++ ++     + +e  l g+D+d+ +v+ a  N    g ++   
  REBASE::M.CsiBAA15III 170 LVALMEPTPSQRIIDPACGTAGFLVAANDWVAQHH----RKDLYNKDTRT----KfTEEGLTGFDFDKTMVRIAAMNMFMHGFEEPNI 249
                            89999********************7654444444....55555433322....2234449************************998 PP

                UPF0020 107 fsqadaakLrlkegevdvivtnpPYGerlgskkalekLYs 146
                                  +kL+ k g++d++++npP+  +l++     kL s
  REBASE::M.CsiBAA15III 250 SHHDSLQKLPTKFGDFDLVLANPPFAGSLDKDSIDPKLKS 289
                            88889********************999988765555444 PP



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