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Align REBASE::M.Ecl884AI to PF01170 (UPF0020)

REBASE::M.Ecl884AI has 490 amino acids

Query:       UPF0020  [M=197]
Accession:   PF01170.18
Description: Putative RNA methylase family UPF0020
Scores for complete sequences (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Sequence           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------           -----------
    3.6e-13   35.8   0.0    7.2e-13   34.8   0.0    1.5  1  REBASE::M.Ecl884AI  


Domain annotation for each sequence (and alignments):
>> REBASE::M.Ecl884AI  
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   34.8   0.0   7.2e-13   7.2e-13      18     134 ..     172     279 ..     168     340 .. 0.76

  Alignments for each domain:
  == domain 1  score: 34.8 bits;  conditional E-value: 7.2e-13
                         HHHHHHTT--TTS-EEETT-TTSHHHHHHHHHHTT--TTTT----SSHHHHHHHHHHHH--EEEEES-HHHHHHHHHHHHHTT-GGGEEEE CS
             UPF0020  18 aalvrlagwkpgepllDPmCGsGtilIEaallganiapgllrefvlelkaeaeeearaelklygsDldrrvvqgareNaekagvgdliefs 108
                         + +v++ + k ge+++DP CG+G++l  a   +++ +            ++ e ++  ++++ g+++++     + +N    g++  ++++
  REBASE::M.Ecl884AI 172 RFMVNRIDPKLGESIMDPACGTGGFLACAFDHVKDNY-----------VKTTEDHKTLQQQIHGVEKKQLPHLLCTTNMLLHGIEVPVQIR 251
                         679***********************55544444444...........2344445556777*******99999999999999999999998 PP

                         E--G..GG--STTS---EEEE------- CS
             UPF0020 109 qada..akLrlkegevdvivtnpPYGer 134
                           +   + L   ++++dvivtnpP+G  
  REBASE::M.Ecl884AI 252 HDNTlnKPLSSWDEQIDVIVTNPPFGGT 279
                         866511456677779***********54 PP



Or compare REBASE::M.Ecl884AI to CDD or PaperBLAST