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Align REBASE::M.EcoG089III to PF01170 (UPF0020)

REBASE::M.EcoG089III has 715 amino acids

Query:       UPF0020  [M=197]
Accession:   PF01170.18
Description: Putative RNA methylase family UPF0020
Scores for complete sequences (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Sequence             Description
    ------- ------ -----    ------- ------ -----   ---- --  --------             -----------
    1.3e-10   27.4   0.0    2.3e-10   26.6   0.0    1.3  1  REBASE::M.EcoG089III  


Domain annotation for each sequence (and alignments):
>> REBASE::M.EcoG089III  
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   26.6   0.0   2.3e-10   2.3e-10      29     134 ..     358     462 ..     350     487 .. 0.70

  Alignments for each domain:
  == domain 1  score: 26.6 bits;  conditional E-value: 2.3e-10
                           TS-EEETT-TTSHHHHHHHHHHTT--TTTT----SSHHHHHHHHHHHH--EEEEES-HHHHHHHHHHHHHTT-GGGEEEEE--GGG--. CS
               UPF0020  29 gepllDPmCGsGtilIEaallganiapgllrefvlelkaeaeeearaelklygsDldrrvvqgareNaekagvgdliefsqadaakLr. 116
                           + ++ DP CGs ++   a  +  + +   ++      k+e  +++ ++  + g+D  +r+v  ar N    g  +   f++ +    + 
  REBASE::M.EcoG089III 358 DFRFCDPTCGSFGFGSVALSQIDKWI--DFKLVLADDKKESLKQKLRDCAFTGADAAPRMVMLARVNMALQGAPKAQIFYTDNSLTTNa 444
                           45899*****9888654444444444..3444455555555555557788*****************9988877665555544433334 PP

                           STTS---EEEE------- CS
               UPF0020 117 lkegevdvivtnpPYGer 134
                           lk +++d+i tnpP+G  
  REBASE::M.EcoG089III 445 LKPNSFDLICTNPPFGTP 462
                           56669***********75 PP



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