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Align REBASE::M.Ega163II to PF01170 (UPF0020)

REBASE::M.Ega163II has 486 amino acids

Query:       UPF0020  [M=197]
Accession:   PF01170.18
Description: Putative RNA methylase family UPF0020
Scores for complete sequences (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Sequence           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------           -----------
    4.3e-11   29.0   0.0    8.4e-11   28.0   0.0    1.4  1  REBASE::M.Ega163II  


Domain annotation for each sequence (and alignments):
>> REBASE::M.Ega163II  
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   28.0   0.0   8.4e-11   8.4e-11      19     192 ..     172     347 ..     167     351 .. 0.79

  Alignments for each domain:
  == domain 1  score: 28.0 bits;  conditional E-value: 8.4e-11
                         HHHHHTT--TTS-EEETT-TTSHHHHHHHHHHTT--TTTT----SSHHHHHHHHHHHH--EEEEES-HHHHHHHHHHHHHTT-GG.GEEEE CS
             UPF0020  19 alvrlagwkpgepllDPmCGsGtilIEaallganiapgllrefvlelkaeaeeearaelklygsDldrrvvqgareNaekagvgd.liefs 108
                          +v l   +p++++ DP  Gs ++l+ a   +++  p l+       ++ +  +  ++  + g D+d+ +++ +  N    gv++ +i+++
  REBASE::M.Ega163II 172 MMVDLMAPTPQDTISDPAMGSAGFLVAASEYVRKHHPELF-------LDSILSKHYHNNMFHGNDMDSTMLRIGAMNMMLHGVDNpQIKYQ 255
                         699999******************************9988.......6666666667778***********************98357777 PP

                         E--GG.G--STTS---EEEE----------HHHHHHHHHH.........HHHHHHHH-TT..-EEEEEESSHHHHHCC---ESEEEEEEET CS
             UPF0020 109 qadaa.kLrlkegevdvivtnpPYGerlgskkalekLYse.........flrelkrvlrgggrlvlltsenkalekaleeralrkvkeknv 189
                         +   + +L+  ++++ ++++npP+  +l+   + ++L  +         fl+ + r l+ ggr+++++++   + +  +++++rk  ++n 
  REBASE::M.Ega163II 256 DSLSQdNLE--REKYSLVLANPPFKGSLDYDTTANDLLASiktkktellFLTLFLRTLKPGGRAAVIVPDGVLFGSSKAHKDIRKEIVENN 344
                         765541455..558**************999888888665222223333667778888888888888888888888888888888877777 PP

                         TEE CS
             UPF0020 190 klg 192
                         kl+
  REBASE::M.Ega163II 345 KLD 347
                         666 PP



Or compare REBASE::M.Ega163II to CDD or PaperBLAST